RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 AQP6Q13520 282 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 LIPKQ5VXJ0 399 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 CFAP77Q6ZQR2 320 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 BTLAQ7Z6A9 289 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 ZNF679Q8IYX0 411 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 SLAMF6Q96DU3 332 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 PELI1Q96FA3 418 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 MAP6Q96JE9 813 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 FUNDC2Q9BWH2 189 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 PLSCR4Q9NRQ2 329 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 SHANK1Q9Y566 2161 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 E9PI62 339 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 RPP14O95059 124 aaKnown RBP14.19□□□□□ -0.14
TRAF3-204ENST00000539721 CPEP16870 476 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 TGFBR2P37173 567 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 PSMB10P40306 273 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 GTF2A1P52655 376 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-204ENST00000539721 ROM1Q03395 351 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 PMPCAQ10713 525 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 NRN1LQ496H8 165 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 EGFL6Q8IUX8 553 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 STARD4Q96DR4 205 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 FAM192AQ9GZU8 254 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 RBM38Q9H0Z9 239 aaKnown RBP14.19□□□□□ -0.14
TRAF3-204ENST00000539721 KCNN2Q9H2S1 579 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 ELOVL3Q9HB03 270 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 CENPMQ9NSP4 180 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 GRIP1Q9Y3R0 1128 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 CEPT1Q9Y6K0 416 aa14.19□□□□□ -0.14
TRAF3-204ENST00000539721 RER1O15258 196 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 CNOT4O95628 575 aaKnown RBP14.18□□□□□ -0.14
TRAF3-204ENST00000539721 ABHD16AO95870 558 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 ITGA5P08648 1049 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 CTSSP25774 331 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 RIDAP52758 137 aaKnown RBP14.18□□□□□ -0.14
TRAF3-204ENST00000539721 CASP6P55212 293 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 SH3BGRP55822 239 aaPredicted RBP14.18□□□□□ -0.14
TRAF3-204ENST00000539721 TPBGQ13641 420 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 SSX1Q16384 188 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 LIPNQ5VXI9 398 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 FOXB2Q5VYV0 432 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 OR7E24Q6IFN5 339 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 SLC16A14Q7RTX9 510 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 GJC3Q8NFK1 279 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 RNF133Q8WVZ7 376 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 FBXO17Q96EF6 278 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 SFXN3Q9BWM7 321 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 LRP12Q9Y561 859 aa14.18□□□□□ -0.14
TRAF3-204ENST00000539721 NCOA6Q14686 2063 aaPredicted RBP14.18□□□□□ -0.14
TRAF3-204ENST00000539721 SPTA1P02549 2419 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 INTS1Q8N201 2190 aaKnown RBP14.17□□□□□ -0.14
TRAF3-204ENST00000539721 A0A096LPE4 126 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 TRGV8A0A0C4DH27 118 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 A0A1W2PPZ6 126 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 HSPB2A8KAH6 182 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 ZNF878C9JN71 531 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 CGAP01215 116 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 H2BFMP0C1H6 154 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 CELP19835 753 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 MRPL28Q13084 256 aaKnown RBP14.17□□□□□ -0.14
TRAF3-204ENST00000539721 HSPB2Q16082 182 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 Q6ZT83 130 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 ZNF627Q7L945 461 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 P2RY8Q86VZ1 359 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-204ENST00000539721 SKA3Q8IX90 412 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 PHC2Q8IXK0 858 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 OR10S1Q8NGN2 331 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 NAA50Q9GZZ1 169 aaKnown RBP14.17□□□□□ -0.14
TRAF3-204ENST00000539721 OPN3Q9H1Y3 402 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-204ENST00000539721 USP24Q9UPU5 2620 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 CACNA1CQ13936 2221 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 NOL3O60936 208 aaKnown RBP14.17□□□□□ -0.14
TRAF3-204ENST00000539721 ZNF254O75437 659 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 IL18BPO95998 194 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 OPRL1P41146 370 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 PCBD1P61457 104 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 TAF13Q15543 124 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 DEGS2Q6QHC5 323 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 ZNF610Q8N9Z0 462 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 OR1K1Q8NGR3 316 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 HAVCR2Q8TDQ0 301 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 NDUFB11Q9NX14 153 aa14.17□□□□□ -0.14
TRAF3-204ENST00000539721 SIRT4Q9Y6E7 314 aaPredicted RBP14.17□□□□□ -0.14
TRAF3-204ENST00000539721 CD8BP10966 210 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 ZNF32P17041 273 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 IGHV1-2P23083 117 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 HIST1H3AP68431 136 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 SCRN3Q0VDG4 424 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 CDK5R1Q15078 307 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 CCDC58Q4VC31 144 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 HIST2H3PS2Q5TEC6 136 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 RPL22L1Q6P5R6 122 aaKnown RBP14.16□□□□□ -0.14
TRAF3-204ENST00000539721 ANKRD16Q6P6B7 361 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 ARL9Q6T311 187 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 HIST2H3AQ71DI3 136 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 SYT9Q86SS6 491 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 ANKRD13BQ86YJ7 626 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 WACQ9BTA9 647 aa14.16□□□□□ -0.14
TRAF3-204ENST00000539721 PNRC2Q9NPJ4 139 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms