RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CTHP32929 405 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 CCR5P51681 352 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 POLR2HP52434 150 aaKnown RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 RAP1BP61224 184 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 RAP1AP62834 184 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 ZNF117Q03924 483 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 EIF2B1Q14232 305 aaKnown RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 PABPC1L2AQ5JQF8 200 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 PDSS1Q5T2R2 415 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 LRFN4Q6PJG9 635 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 SLC22A18ASQ8N1D0 253 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 OR1J2Q8NGS2 313 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 NUDT9Q9BW91 350 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 MS4A7Q9GZW8 240 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 C8orf33Q9H7E9 229 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 GPR27Q9NS67 375 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 TAS2R4Q9NYW5 299 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 PURGQ9UJV8 347 aaKnown RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 LRP12Q9Y561 859 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 MRPS18BQ9Y676 258 aaKnown RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 LRP4O75096 1905 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 HEATR5AQ86XA9 2040 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 CPED1A4D0V7 1026 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 NPIPB13A6NJU9 1138 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 TMEM150CB9EJG8 249 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 NPIPB4C9JG80 1138 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 SRSF10O75494 262 aaKnown RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 SEMA4FO95754 770 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 IGKV3-11P04433 115 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 FBXO45P0C2W1 286 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 RPS27P42677 84 aaKnown RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 PRKXP51817 358 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 INSM1Q01101 510 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 MC2RQ01718 297 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 NAAAQ02083 359 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 NR0B2Q15466 257 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 TAF13Q15543 124 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 PCK2Q16822 640 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 SLC35D2Q76EJ3 337 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 LYPD6Q86Y78 171 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 ZNF248Q8NDW4 579 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 OR13C3Q8NGS6 347 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 STOML3Q8TAV4 291 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 PPP1R1CQ8WVI7 109 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 ADIPOR1Q96A54 375 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 UQCC2Q9BRT2 126 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 PTDSS2Q9BVG9 487 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 ZNF471Q9BX82 626 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-209ENST00000539584 FBLN5Q9UBX5 448 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 MKL2Q9ULH7 1088 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 GTF2A1LQ9UNN4 478 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 EML5Q05BV3 1969 aa11.91□□□□□ -0.5
UBE3B-209ENST00000539584 M0QYG6 137 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 HSD11B1P28845 292 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 IL12BP29460 328 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 DLSTP36957 453 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 FASLGP48023 281 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 GABRA4P48169 554 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 LUMP51884 338 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-209ENST00000539584 TAS2R31P59538 309 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 FAM189A2Q15884 450 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 ZNF260Q3ZCT1 412 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 TMEM151BQ8IW70 566 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 SVBPQ8N300 66 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 RELL2Q8NC24 303 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-209ENST00000539584 FAM46BQ96A09 425 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 MVB12AQ96EY5 273 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 ADOQ96SZ5 270 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 CMKLR1Q99788 373 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 RPP25Q9BUL9 199 aaKnown RBP11.9□□□□□ -0.5
UBE3B-209ENST00000539584 PRELID3BQ9Y3B1 194 aa11.9□□□□□ -0.5
UBE3B-209ENST00000539584 C9orf170A2RU37 121 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 C11orf98E9PRG8 122 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 SIGLEC6O43699 453 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ATG12O94817 140 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 DUS4LO95620 317 aaKnown RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 BPNT1O95861 308 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF823P16415 610 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 CD1CP29017 333 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 CAPZBP47756 277 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 PNLIPRP2P54317 469 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 PPIAP62937 165 aaKnown RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 CXADRP78310 365 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 IL13RA1P78552 427 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 DEFA5Q01523 94 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 INPP5JQ15735 1006 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 PNLIPRP3Q17RR3 467 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 SCGB2B2Q4G0G5 96 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 PRAMEF17Q5VTA0 474 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 OR2W3Q7Z3T1 314 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 GRINAQ7Z429 371 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 PARGQ86W56 976 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 JAGN1Q8N5M9 183 aa11.89□□□□□ -0.51
UBE3B-209ENST00000539584 FAM160A2Q8N612 972 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 ATOH1Q92858 354 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-209ENST00000539584 NPAS1Q99742 590 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms