RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ZNF735P0CB33 412 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 ETS2P15036 469 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 CEACAM3P40198 252 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 TNFSF9P41273 254 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 GBX2P52951 348 aaPredicted RBP1.82□□□□□ -2.12
CCDC7-209ENST00000539197 GPX6P59796 221 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 ACTR1AP61163 376 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 IL24Q13007 206 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 CHIT1Q13231 466 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 SPECC1LQ69YQ0 1117 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 TMEM104Q8NE00 496 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 OR10J6PQ8NGY7 276 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 SLC41A3Q96GZ6 507 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF488Q96MN9 340 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 MAPK8IP3Q9UPT6 1336 aa1.82□□□□□ -2.12
CCDC7-209ENST00000539197 TRAV19A0A0A6YYK7 116 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 POLR1CO15160 346 aaPredicted RBP1.81□□□□□ -2.12
CCDC7-209ENST00000539197 GLRA2P23416 452 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 TGFBR1P36897 503 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 SSR4P51571 173 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 GPM6BQ13491 265 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 ANKRD26P1Q6NSI1 321 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 SPINT4Q6UDR6 99 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 KDELC1Q6UW63 502 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 FBXW12Q6X9E4 464 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF606Q8WXB4 792 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 MRGPRFQ96AM1 343 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 GALNT14Q96FL9 552 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 C12orf42Q96LP6 360 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 HSD17B10Q99714 261 aaKnown RBP1.81□□□□□ -2.12
CCDC7-209ENST00000539197 OR52D1Q9H346 318 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 SAMSN1Q9NSI8 373 aaKnown RBP1.81□□□□□ -2.12
CCDC7-209ENST00000539197 KLHL28Q9NXS3 571 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 CTNNA3Q9UI47 895 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 KANK1Q14678 1352 aa1.81□□□□□ -2.12
CCDC7-209ENST00000539197 A0A1W2PPV9 198 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF716A6NP11 495 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 HLA-DQB1P01920 261 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 SERPIND1P05546 499 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 OR5H8P0DN80 308 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 HCAR3P49019 387 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 AIF1P55008 147 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 MXD1Q05195 221 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 BAMBIQ13145 260 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 QPRTQ15274 297 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 C6orf226Q5I0X4 101 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 CENPPQ6IPU0 288 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 SLC16A13Q7RTY0 426 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 CDKL3Q8IVW4 592 aaPredicted RBP1.8□□□□□ -2.12
CCDC7-209ENST00000539197 TMEM256Q8N2U0 113 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 APCDD1LQ8NCL9 501 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 BHLHE23Q8NDY6 225 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 SDR9C7Q8NEX9 313 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 OR1P1Q8NH06 330 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 CIRBP-AS1Q8TBR5 109 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 PTX4Q96A99 478 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 MYCBPQ99417 103 aaPredicted RBP1.8□□□□□ -2.12
CCDC7-209ENST00000539197 GON7Q9BXV9 100 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 NT5C3AQ9H0P0 336 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 SLC7A8Q9UHI5 535 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF639Q9UID6 485 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 NUP50Q9UKX7 468 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 CNTNAP1P78357 1384 aa1.8□□□□□ -2.12
CCDC7-209ENST00000539197 ANKRD12Q6UB98 2062 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF98A6NK75 572 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 OR52A4PA6NMU1 304 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 H0YJW9 148 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 CXCL11O14625 94 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 CDC40O60508 579 aaKnown RBP eCLIP1.79□□□□□ -2.12
CCDC7-209ENST00000539197 CLIC3O95833 236 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 IL1BP01584 269 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 CD3GP09693 182 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 OR8U9P0C7N5 309 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 MCF2P10911 925 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 RAB3AP20336 220 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 KITLGP21583 273 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 P2RX1P51575 399 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 PRMT2P55345 433 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 CRADDP78560 199 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 IL15RAQ13261 267 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 MPV17L2Q567V2 206 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 TCEAL5Q5H9L2 206 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 TMEM205Q6UW68 189 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 CASP12Q6UXS9 341 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 ZCCHC7Q8N3Z6 543 aaKnown RBP1.79□□□□□ -2.12
CCDC7-209ENST00000539197 TMEM105Q8N8V8 129 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 ST20-AS1Q8NBB2 130 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 OR8J1Q8NGP2 316 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 OR1S2Q8NGQ3 325 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF502Q8TBZ5 544 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 C17orf50Q8WW18 174 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 TCEAL3Q969E4 200 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 PKNOX2Q96KN3 472 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 RSG1Q9BU20 258 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 ROPN1BQ9BZX4 212 aaPredicted RBP1.79□□□□□ -2.12
CCDC7-209ENST00000539197 SLC38A10Q9HBR0 1119 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 ZNF230Q9UIE0 474 aaPredicted RBP1.79□□□□□ -2.12
CCDC7-209ENST00000539197 ST3GAL6Q9Y274 331 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 CBY1Q9Y3M2 126 aa1.79□□□□□ -2.12
CCDC7-209ENST00000539197 KCNE3Q9Y6H6 103 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms