RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 FAM157CP0CG43 387 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 LIPAP38571 399 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 GSSP48637 474 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 ARHGDIAP52565 204 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 HMGA2P52926 109 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 TMEM33P57088 247 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 KCNMB1Q16558 191 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 RFX4Q33E94 735 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 ZMAT1Q5H9K5 638 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 LCN8Q6JVE9 175 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 ZNF774Q6NX45 483 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 C1orf94Q6P1W5 598 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 ZNF620Q6ZNG0 422 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 PTCHD4Q6ZW05 846 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 RFPL4BQ6ZWI9 263 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 NPEPL1Q8NDH3 523 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 ABHD4Q8TB40 342 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 MSI2Q96DH6 328 aaKnown RBP9.88□□□□□ -0.83
RTN3-209ENST00000538995 MARS2Q96GW9 593 aaKnown RBP9.88□□□□□ -0.83
RTN3-209ENST00000538995 C1orf159Q96HA4 380 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 C4orf45Q96LM5 186 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 RACGAP1Q9H0H5 632 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 OR52D1Q9H346 318 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 MAGIXQ9H6Y5 334 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 EMC7Q9NPA0 242 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 CYSLTR2Q9NS75 346 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 IL20RAQ9UHF4 553 aa9.88□□□□□ -0.83
RTN3-209ENST00000538995 PRPF19Q9UMS4 504 aaKnown RBP9.88□□□□□ -0.83
RTN3-209ENST00000538995 CHD3Q12873 2000 aaKnown RBP9.88□□□□□ -0.83
RTN3-209ENST00000538995 KIAA1324LA8MWY0 1029 aaPredicted RBP9.87□□□□□ -0.83
RTN3-209ENST00000538995 RP2O75695 350 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 PPP1R3DO95685 299 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 ABHD16AO95870 558 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 SCG5P05408 212 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 ADH4P08319 380 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 GSTM3P21266 225 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 ATP6V1B2P21281 511 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 CDKN2AP42771 156 aaKnown RBP9.87□□□□□ -0.83
RTN3-209ENST00000538995 GPR6P46095 362 aaPredicted RBP9.87□□□□□ -0.83
RTN3-209ENST00000538995 HTR5AP47898 357 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 PPP1CBP62140 327 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 TEKQ02763 1124 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 TSPAN31Q12999 210 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 RPL13AP3Q6NVV1 102 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 PGBD2Q6P3X8 592 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 VASH1Q7L8A9 365 aaPredicted RBP9.87□□□□□ -0.83
RTN3-209ENST00000538995 JAZF1Q86VZ6 243 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 SLC25A40Q8TBP6 338 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 KLF14Q8TD94 323 aaPredicted RBP9.87□□□□□ -0.83
RTN3-209ENST00000538995 GNPDA2Q8TDQ7 276 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 IPCEF1Q8WWN9 437 aaPredicted RBP9.87□□□□□ -0.83
RTN3-209ENST00000538995 COG8Q96MW5 612 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 ERMAPQ96PL5 475 aaPredicted RBP9.87□□□□□ -0.83
RTN3-209ENST00000538995 TRIM15Q9C019 465 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 NUAK2Q9H093 628 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 SHARPINQ9H0F6 387 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 TBCCD1Q9NVR7 557 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 PLEK2Q9NYT0 353 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 ASH2LQ9UBL3 628 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 COA3Q9Y2R0 106 aaPredicted RBP9.87□□□□□ -0.83
RTN3-209ENST00000538995 LYVE1Q9Y5Y7 322 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 COL6A5A8TX70 2615 aa9.87□□□□□ -0.83
RTN3-209ENST00000538995 MXRA5Q9NR99 2828 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 IGLV1-36A0A0B4J1U3 117 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 TCRBV5S2A0A599 114 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 PLSCR5A0PG75 271 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 LRP5LA4QPB2 252 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 OR6C6A6NF89 314 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 LYNX1G3V0Z9 82 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 RENP00797 406 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 TFP02787 698 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 LYNX1P0DP58 116 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 GAAP10253 952 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 HNF1AP20823 631 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 IGFBP5P24593 272 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 NOS3P29474 1203 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 MPV17P39210 176 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 MAGEB1P43366 347 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 RGS6P49758 472 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 ZNF81P51508 661 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 MMP15P51511 669 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 CDH15P55291 814 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 GLO1Q04760 184 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 TRIM25Q14258 630 aaKnown RBP9.86□□□□□ -0.83
RTN3-209ENST00000538995 GK3PQ14409 553 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 ALKBH6Q3KRA9 238 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 SPATA46Q5T0L3 261 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 LEG1Q6P5S2 330 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 CYP2R1Q6VVX0 501 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 DHFR2Q86XF0 187 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 LINC01356Q8N9X3 169 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 OR52L1Q8NGH7 329 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 YIPF5Q969M3 257 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 ASB9Q96DX5 294 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 DCLRE1CQ96SD1 692 aaKnown RBP9.86□□□□□ -0.83
RTN3-209ENST00000538995 DIRC2Q96SL1 478 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 IFT27Q9BW83 186 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 BEX2Q9BXY8 128 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 OR2J1Q9GZK6 312 aa9.86□□□□□ -0.83
RTN3-209ENST00000538995 HDHD2Q9H0R4 259 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms