RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 C12orf71A8MTZ7 269 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 SOCS2O14508 198 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 TPD52L2O43399 206 aaKnown RBP12.76□□□□□ -0.37
RAB40B-202ENST00000538809 DOK2O60496 412 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 ICMTO60725 284 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 NGFP01138 241 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 IGHV3-13P01766 116 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 HNF1AP20823 631 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 CALB2P22676 271 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 FPR3P25089 353 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 GCH1P30793 250 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 RRM2P31350 389 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 GSSP48637 474 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 HMGA2P52926 109 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 PCBD1P61457 104 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 PPP1CBP62140 327 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
RAB40B-202ENST00000538809 TSTQ16762 297 aaKnown RBP12.76□□□□□ -0.37
RAB40B-202ENST00000538809 ZNF718Q3SXZ3 478 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 MTX3Q5HYI7 312 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 LCN8Q6JVE9 175 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 SMARCD3Q6STE5 483 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 CYP2R1Q6VVX0 501 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 DPY19L2P2Q6ZN68 376 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 PTCHD4Q6ZW05 846 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 SYT9Q86SS6 491 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 ZDHHC21Q8IVQ6 265 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 ALDH16A1Q8IZ83 802 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 MCUR1Q96AQ8 359 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 MARS2Q96GW9 593 aaKnown RBP12.76□□□□□ -0.37
RAB40B-202ENST00000538809 OR2J1Q9GZK6 312 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 SYT4Q9H2B2 425 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 KRCC1Q9NPI7 259 aaPredicted RBP12.76□□□□□ -0.37
RAB40B-202ENST00000538809 IER3IP1Q9Y5U9 82 aa12.76□□□□□ -0.37
RAB40B-202ENST00000538809 FAM157AC9JC47 383 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 SPRY3O43610 288 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 SLC16A7O60669 478 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 CDKN2AP42771 156 aaKnown RBP12.75□□□□□ -0.37
RAB40B-202ENST00000538809 HTR5AP47898 357 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 ZNF81P51508 661 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 MRPS11P82912 194 aaKnown RBP12.75□□□□□ -0.37
RAB40B-202ENST00000538809 MS4A2Q01362 244 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 AVPI1Q5T686 147 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 C1orf94Q6P1W5 598 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 USP51Q70EK9 711 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 ADCK1Q86TW2 530 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 PHC2Q8IXK0 858 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 FANK1Q8TC84 345 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 KLF14Q8TD94 323 aaPredicted RBP12.75□□□□□ -0.37
RAB40B-202ENST00000538809 WACQ9BTA9 647 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 OR52D1Q9H346 318 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 MUC13Q9H3R2 512 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 POFUT1Q9H488 388 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 LPAR2Q9HBW0 351 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 TREM2Q9NZC2 230 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 CACNG2Q9Y698 323 aa12.75□□□□□ -0.37
RAB40B-202ENST00000538809 IGHV1-69-2A0A0G2JMI3 117 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 ZSCAN5BA6NJL1 495 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 ARPC3O15145 178 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 SGCEO43556 437 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 OR10H3O60404 316 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 MPZL1O95297 269 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 PPP1R3DO95685 299 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 ABHD16AO95870 558 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 IGHV1-46P01743 117 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 MT-ND5P03915 603 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 RPS6KA3P51812 740 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 MVKQ03426 396 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 SCRN3Q0VDG4 424 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 DBPQ10586 325 aaPredicted RBP12.74□□□□□ -0.37
RAB40B-202ENST00000538809 HNRNPA0Q13151 305 aaKnown RBP12.74□□□□□ -0.37
RAB40B-202ENST00000538809 TRIM25Q14258 630 aaKnown RBP12.74□□□□□ -0.37
RAB40B-202ENST00000538809 RFX4Q33E94 735 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 PGBD2Q6P3X8 592 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 OR4C15Q8NGM1 316 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 C1orf159Q96HA4 380 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 C4orf45Q96LM5 186 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 RACGAP1Q9H0H5 632 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 SAP30LQ9HAJ7 183 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 DECR2Q9NUI1 292 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 NKIRAS2Q9NYR9 191 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 TAS2R1Q9NYW7 299 aa12.74□□□□□ -0.37
RAB40B-202ENST00000538809 COA3Q9Y2R0 106 aaPredicted RBP12.74□□□□□ -0.37
RAB40B-202ENST00000538809 DCTN6O00399 190 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 KHDRBS3O75525 346 aaKnown RBP12.73□□□□□ -0.37
RAB40B-202ENST00000538809 GPANK1O95872 356 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 COX5BP10606 129 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 MMP15P51511 669 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 ARHGDIAP52565 204 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 TMEM33P57088 247 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 TSPAN31Q12999 210 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 AQP6Q13520 282 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 KCNMB1Q16558 191 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 MOGQ16653 247 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 MBNL2Q5VZF2 373 aaKnown RBP12.73□□□□□ -0.37
RAB40B-202ENST00000538809 ZNF770Q6IQ21 691 aaPredicted RBP12.73□□□□□ -0.37
RAB40B-202ENST00000538809 UNQ6126/PRO20091Q6UXV3 157 aa12.73□□□□□ -0.37
RAB40B-202ENST00000538809 ZNF620Q6ZNG0 422 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms