RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 I3L521 148 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 GAPDHSO14556 408 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 SLC16A6O15403 523 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 TMIGD3P0DMS9 266 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 SPI1P17947 270 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 OPRL1P41146 370 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 AKR1C1Q04828 323 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 FGFBP1Q14512 234 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 BCL2A1Q16548 175 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 C6orf183Q5T699 404 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 WDR74Q6RFH5 385 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 ARIH2OSQ8N7S6 290 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 DVL3Q92997 716 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 ANKRD9Q96BM1 317 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 ZFP57Q9NU63 452 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 RCE1Q9Y256 329 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 ASB4Q9Y574 426 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 LOC107986453A0A1B0GWG9 222 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 NOTOA8MTQ0 251 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 HPP00738 406 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 HLA-AP01891 365 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 RAB40ALP0C0E4 278 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 FTH1P19P0C7X4 201 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SOX18P35713 384 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SNCAP37840 140 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 RBP2P50120 134 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 NKG7Q16617 165 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 METTL11BQ5VVY1 283 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SHEQ5VZ18 495 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 KIRREL2Q6UWL6 708 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 LRRC28Q86X40 367 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 ZNF547Q8IVP9 402 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 OR2Z1Q8NG97 314 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 RAB40AQ8WXH6 277 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 UBE2FQ969M7 185 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 TMEM246Q9BRR3 403 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 ACER3Q9NUN7 267 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 KIAA1456Q9P272 454 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 PSORS1C1Q9UIG5 152 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 NAP1L6A6NFF2 107 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 MAGEB4O15481 346 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 LYZL6O75951 148 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 UBL3O95164 117 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 ZIC2O95409 532 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 NRASP01111 189 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 CRYBA1P05813 215 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 ATF4P18848 351 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 SRMP19623 302 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SRP14P37108 136 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 SRP9P49458 86 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 RAE1P78406 368 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 ZNF117Q03924 483 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 PHLDA2Q53GA4 152 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 EMC4Q5J8M3 183 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 OGFOD3Q6PK18 319 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 LYPD8Q6UX82 237 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 LHFPL2Q6ZUX7 228 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 CAMKMTQ7Z624 323 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 ST8SIA4Q92187 359 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 KTI12Q96EK9 354 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 ZC3H10Q96K80 434 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 TEAD3Q99594 435 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SERTAD4Q9NUC0 356 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 ING1Q9UK53 422 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 PRELID3BQ9Y3B1 194 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 ZNFX1Q9P2E3 1918 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 LRRC37AA6NMS7 1700 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 BHLHE40O14503 412 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 PPIHO43447 177 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 SPDEFO95238 335 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 EML2O95834 649 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ATP1B1P05026 303 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 CPT2P23786 658 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 PTPN6P29350 595 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ANKRD13BQ86YJ7 626 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR10J5Q8NHC4 309 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 TCTEX1D2Q8WW35 142 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 SPACA5Q96QH8 159 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ATF6BQ99941 703 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 TXNIPQ9H3M7 391 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 GPR84Q9NQS5 396 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 TMEM100Q9NV29 134 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 NECAP2Q9NVZ3 263 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 DIMT1Q9UNQ2 313 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 PPP1R3CQ9UQK1 317 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 GPR55Q9Y2T6 319 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 MRPS18BQ9Y676 258 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 A0A1W2PPV4 95 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 A0A1W2PQF6 199 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 H7C1Q1 480 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ARPC5O15511 151 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 CDC14BO60729 498 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 LILRB5O75023 590 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 IFNA10P01566 189 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 APOA2P02652 100 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ZNF728P0DKX0 622 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 NAGAP17050 411 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 CYCSP99999 105 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 POU4F3Q15319 338 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 TBCEQ15813 527 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms