RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 NDUFB7P17568 137 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 GPX2P18283 190 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 CYB561P49447 251 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SLC35A2P78381 396 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 PDZK1IP1Q13113 114 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 OR2F1Q13607 317 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 EXT1Q16394 746 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 ADAMTSL4Q6UY14 1074 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM102Q8N9M5 508 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 OR51S1Q8NGJ8 323 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 M1APQ8TC57 530 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM255BQ8WV15 326 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SLC35B4Q969S0 331 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 C20orf27Q9GZN8 174 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 RBM38Q9H0Z9 239 aaKnown RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF629Q9UEG4 869 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 COL4A4P53420 1690 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 HSD17B6O14756 317 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 GRPP07492 148 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 APEHP13798 732 aaKnown RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM64Q6YI46 380 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 GTF2H5Q6ZYL4 71 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 OR10G3Q8NGC4 313 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TM4SF18Q96CE8 201 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 Q96M85 177 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 TMPRSS5Q9H3S3 457 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 GNB4Q9HAV0 340 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SLC35D1Q9NTN3 355 aa9.76□□□□□ -0.85
CLIP1-209ENST00000537178 DHCR7Q9UBM7 475 aaKnown RBP9.76□□□□□ -0.85
CLIP1-209ENST00000537178 SLC31A2O15432 143 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 SIX6O95475 246 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 CSNK1EP49674 416 aaKnown RBP9.75□□□□□ -0.85
CLIP1-209ENST00000537178 RBP2P50120 134 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF90Q03938 601 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 Q6ZSR9 355 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 PTRH1Q86Y79 214 aaKnown RBP9.75□□□□□ -0.85
CLIP1-209ENST00000537178 LMNTD1Q8N9Z9 388 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 SMIM14Q96QK8 99 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 CSF3RQ99062 836 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 HCFC2Q9Y5Z7 792 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 DDOSTP39656 456 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 GPR85P60893 370 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 IL10RAQ13651 578 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 DUSP6Q16828 381 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 ABHD17CQ6PCB6 329 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 C17orf99Q6UX52 265 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM104Q8NE00 496 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 APH1BQ8WW43 257 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 RNF32Q9H0A6 362 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 RAB18Q9NP72 206 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 UFSP2Q9NUQ7 469 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 MRPS2Q9Y399 296 aaKnown RBP9.75□□□□□ -0.85
CLIP1-209ENST00000537178 TSC2P49815 1807 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 A0A1B0GTW7 788 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 TMEM129A0AVI4 362 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 H3BNC9 293 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 RPL27P61353 136 aaKnown RBP9.75□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF85Q03923 595 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 NHSL2Q5HYW2 709 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 SLC39A13Q96H72 371 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 SOX7Q9BT81 388 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 OR2C1O95371 312 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 CLEC2LP0C7M8 214 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 POU3F3P20264 500 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-209ENST00000537178 KHDC1LQ5JSQ8 128 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 ZADH2Q8N4Q0 377 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 STACQ99469 402 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 VPS25Q9BRG1 176 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 JAM3Q9BX67 310 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 SEMA4CQ9C0C4 833 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 AK3Q9UIJ7 227 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 STRAPQ9Y3F4 350 aaKnown RBP9.75□□□□□ -0.85
CLIP1-209ENST00000537178 V9GYS6 101 aa9.75□□□□□ -0.85
CLIP1-209ENST00000537178 COL4A5P29400 1685 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 FITM1A5D6W6 292 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 JUNBP17275 347 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 RPS19BP1Q86WX3 136 aaKnown RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 LYSMD2Q8IV50 215 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 FAM185AQ8N0U4 392 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ZNF740Q8NDX6 193 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 TVP23CQ96ET8 276 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 MED30Q96HR3 178 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ELF4Q99607 663 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 CTDSP1Q9GZU7 261 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 TWSG1Q9GZX9 223 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 DUSP22Q9NRW4 184 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 LANCL2Q9NS86 450 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 USP22Q9UPT9 525 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 PTPRZ1P23471 2315 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 SLC5A10A0PJK1 596 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 AQP7O14520 342 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ARPC3O15145 178 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-209ENST00000537178 ALOX12BO75342 701 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 NTF3P20783 257 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 RNF151Q2KHN1 245 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 LSMEM2Q8N112 164 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 RASD2Q96D21 266 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 DDOQ99489 341 aa9.74□□□□□ -0.85
CLIP1-209ENST00000537178 POFUT1Q9H488 388 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms