RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 SQSTM1Q13501 440 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 GLYATL3Q5SZD4 288 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 FAM166AQ6J272 317 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 DNM1P34Q6PK57 102 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 APCDD1LQ8NCL9 501 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 OR51S1Q8NGJ8 323 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 ASB10Q8WXI3 467 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 ST8SIA1Q92185 356 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 SLC17A5Q9NRA2 495 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 CGGBP1Q9UFW8 167 aaPredicted RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 R4GMQ9 66 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 ADAMTS9Q9P2N4 1935 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 ARPC4-TTLL3A0A0A6YYG9 625 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 A0A1W2PPC1 479 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 UBE2QL1A1L167 161 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 DCDC2BA2VCK2 349 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 TTLL8A6PVC2 850 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 HEXBP07686 556 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 DNASE1L1P49184 302 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 RAP2BP61225 183 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 POU3F1Q03052 451 aaPredicted RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 MFSD13AQ14CX5 517 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 TMEM65Q6PI78 240 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 ZNF627Q7L945 461 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 SLC26A10Q8NG04 563 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 DVL3Q92997 716 aaPredicted RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 ATXN7L1Q9ULK2 861 aaPredicted RBP11.79□□□□□ -0.52
LDLR-203ENST00000535915 HHLA2Q9UM44 414 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 SRPK3Q9UPE1 567 aa11.79□□□□□ -0.52
LDLR-203ENST00000535915 CD3DP04234 171 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 GIMD1P0DJR0 217 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 DAP3P51398 398 aaKnown RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 TLE3Q04726 772 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 RHBDD2Q6NTF9 364 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 ARSKQ6UWY0 536 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 NHLRC1Q6VVB1 395 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 H1FNTQ75WM6 255 aaPredicted RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 SLC36A1Q7Z2H8 476 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 ANKRD37Q7Z713 158 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 UXS1Q8NBZ7 420 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 SLC25A28Q96A46 364 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 WDR89Q96FK6 387 aaPredicted RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 C5orf34Q96MH7 638 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 RBP7Q96R05 134 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 TGIF2Q9GZN2 237 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 DUSP15Q9H1R2 295 aaPredicted RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 PRMT8Q9NR22 394 aaPredicted RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 MED29Q9NX70 200 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 ZMAT5Q9UDW3 170 aaKnown RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 ATPIF1Q9UII2 106 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 LOC107986453A0A1B0GWG9 222 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 CFDP00746 253 aaPredicted RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 IGFBP3P17936 291 aaPredicted RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 APOBEC1P41238 236 aaKnown RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 SPOCK1Q08629 439 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 CSRP2Q16527 193 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 HYAL4Q2M3T9 481 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 WDFY1Q8IWB7 410 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 JAGN1Q8N5M9 183 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 SLC38A9Q8NBW4 561 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 OR51A2Q8NGJ7 313 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 OR6N1Q8NGY5 312 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 MFSD8Q8NHS3 518 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 ELMOD3Q96FG2 381 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 UBE2ZQ9H832 354 aaPredicted RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 MYEF2Q9P2K5 600 aaKnown RBP11.78□□□□□ -0.52
LDLR-203ENST00000535915 OR52A1Q9UKL2 312 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 MAB21L2Q9Y586 359 aa11.78□□□□□ -0.52
LDLR-203ENST00000535915 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 TMEM269A0A1B0GVZ9 245 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 H3BML4 177 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 EIF1AYO14602 144 aaKnown RBP11.77□□□□□ -0.53
LDLR-203ENST00000535915 SRSF10O75494 262 aaKnown RBP11.77□□□□□ -0.53
LDLR-203ENST00000535915 FSTP19883 344 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 PI4KAP42356 2102 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 HSF1Q00613 529 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 ZP4Q12836 540 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 OPCMLQ14982 345 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 STEAP1BQ6NZ63 245 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 CORO6Q6QEF8 472 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 TMPRSS9Q7Z410 1059 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.77□□□□□ -0.53
LDLR-203ENST00000535915 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 CMKLR1Q99788 373 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 TTYH1Q9H313 450 aaPredicted RBP11.77□□□□□ -0.53
LDLR-203ENST00000535915 CENPMQ9NSP4 180 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 MRPS18BQ9Y676 258 aaKnown RBP11.77□□□□□ -0.53
LDLR-203ENST00000535915 IGKV1D-43A0A0B4J1Z2 117 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 VSTM2BA6NLU5 285 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 SHISA8B8ZZ34 492 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 OR2A4O95047 310 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 C4BPBP20851 252 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 ARRB1P49407 418 aaPredicted RBP11.77□□□□□ -0.53
LDLR-203ENST00000535915 DLX5P56178 289 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 ACTBP60709 375 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 UBE2MP61081 183 aaKnown RBP11.77□□□□□ -0.53
LDLR-203ENST00000535915 RAB14P61106 215 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 ACTG1P63261 375 aa11.77□□□□□ -0.53
LDLR-203ENST00000535915 FOXF1Q12946 379 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms