RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MUC20Q8N307 709 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 KLHL36Q8N4N3 616 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 MOSPD2Q8NHP6 518 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 PFN4Q8NHR9 129 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 ST7LQ8TDW4 575 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 UPRTQ96BW1 309 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 ATP6V1G3Q96LB4 118 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 DCLRE1CQ96SD1 692 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 NPHS2Q9NP85 383 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 MMP26Q9NRE1 261 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 A4GNTQ9UNA3 340 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 LRCH1Q9Y2L9 728 aa9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-206ENST00000535668 A0A1B0GUS0 222 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 OR6C6A6NF89 314 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 KPNA4O00629 521 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 SURF4O15260 269 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 SPRY3O43610 288 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 WNT2P09544 360 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 UMPSP11172 480 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 GSTM3P21266 225 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 MSR1P21757 451 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 LAP3P28838 519 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 MDH2P40926 338 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 LSM6P62312 80 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 BTG1P62324 171 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 SELENOWP63302 87 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 PRKCDQ05655 676 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 FMODQ06828 376 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 PIN1Q13526 163 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 KCNMB1Q16558 191 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 TSTQ16762 297 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 C11orf91Q3C1V1 193 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 FBXW12Q6X9E4 464 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 RBMS3Q6XE24 437 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 THSD4Q6ZMP0 1018 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 Q6ZR03 302 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 TMPRSS11FQ6ZWK6 438 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 OFCC1Q8IZS5 231 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 SLC26A7Q8TE54 656 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 PTP4A1Q93096 173 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 BPIFA2Q96DR5 249 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 PRRC1Q96M27 445 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 MAGEB18Q96M61 343 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 ANKRD19PQ9H560 264 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 POLE4Q9NR33 117 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 SH3GLB1Q9Y371 365 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 AUP1Q9Y679 476 aa9.43□□□□□ -0.9
CLSTN3-206ENST00000535668 BBIP1A8MTZ0 92 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 TMEM178BH3BS89 294 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 KCNAB3O43448 404 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 SASH3O75995 380 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 TNFSF4P23510 183 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 KDELR2P33947 212 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 GUCA1AP43080 201 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 GATA4P43694 442 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 RGS6P49758 472 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 TAS2R41P59536 307 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 RPL15P61313 204 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 ERVK-25P63136 954 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 HIST1H3AP68431 136 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 LCN2P80188 198 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 TNFAIP6P98066 277 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 SCRN3Q0VDG4 424 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 NFYCQ13952 458 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 ZMYND11Q15326 602 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 SPRNQ5BIV9 151 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 HIST2H3PS2Q5TEC6 136 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 SLC27A4Q6P1M0 643 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 LEG1Q6P5S2 330 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 LRRN1Q6UXK5 716 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 COLCA1Q6ZS62 124 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 HIST2H3AQ71DI3 136 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 FAM122BQ7Z309 247 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 CELF2-AS1Q8N7Q2 184 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 SIGLECL1Q8N7X8 197 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 AKR7LQ8NHP1 331 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 ABHD4Q8TB40 342 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 GPX7Q96SL4 187 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 GCM1Q9NP62 436 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 ZNF69Q9UC07 566 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 AP3M1Q9Y2T2 418 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 PCDHGB1Q9Y5G3 927 aa9.42□□□□□ -0.9
CLSTN3-206ENST00000535668 KIR2DS1A0A191URI9 304 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 DNAJC9-AS1A6NH13 148 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 TPD52L2O43399 206 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 EDF1O60869 148 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 PTBP3O95758 552 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 CD80P33681 288 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 MTNR1AP48039 350 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 CD47Q08722 323 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 AQP6Q13520 282 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 SGCAQ16586 387 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 KRTAP27-1Q3LI81 207 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 RABL3Q5HYI8 236 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 ZNF362Q5T0B9 420 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 VASH1Q7L8A9 365 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 TMEM86BQ8N661 226 aa9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 GEMIN6Q8WXD5 167 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-206ENST00000535668 ERGIC1Q969X5 290 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms