RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ASRGL1Q7L266 308 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 TMEM179BQ7Z7N9 219 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 ADCK1Q86TW2 530 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 MYPOPQ86VE0 399 aaPredicted RBP7.5□□□□□ -1.21
COPB1-210ENST00000533533 HS3ST5Q8IZT8 346 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 SDR9C7Q8NEX9 313 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 OR52E2Q8NGJ4 325 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 FGFBP3Q8TAT2 258 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 TEX47Q8TBZ9 253 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 HPS1Q92902 700 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 OTULINQ96BN8 352 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 GPX7Q96SL4 187 aaPredicted RBP7.5□□□□□ -1.21
COPB1-210ENST00000533533 NMNAT3Q96T66 252 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 FEVQ99581 238 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 NIPSNAP1Q9BPW8 284 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 PLA2G12AQ9BZM1 189 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 RAB1BQ9H0U4 201 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 OR51B6Q9H340 312 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 FN3KQ9H479 309 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 SIAEQ9HAT2 523 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 SMURF2Q9HAU4 748 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 SRA1Q9HD15 236 aaKnown RBP7.5□□□□□ -1.21
COPB1-210ENST00000533533 EMC7Q9NPA0 242 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 ARMC1Q9NVT9 282 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.5□□□□□ -1.21
COPB1-210ENST00000533533 TMEFF2Q9UIK5 374 aaPredicted RBP7.5□□□□□ -1.21
COPB1-210ENST00000533533 COA3Q9Y2R0 106 aaPredicted RBP7.5□□□□□ -1.21
COPB1-210ENST00000533533 POLR1DQ9Y2S0 133 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 AP4S1Q9Y587 144 aa7.5□□□□□ -1.21
COPB1-210ENST00000533533 LILRA1O75019 489 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 IGKV3-15P01624 115 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 HLA-DQA2P01906 255 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 TACSTD2P09758 323 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 CCL2P13500 99 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 DAOP14920 347 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 CTLA4P16410 223 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 ZNF32P17041 273 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 MSR1P21757 451 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 FASP25445 335 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 CALCRP30988 508 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 IL2RGP31785 369 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 APLNRP35414 380 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 SRP14P37108 136 aaKnown RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 CHN2P52757 468 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 MRPS34P82930 218 aaKnown RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.49□□□□□ -1.21
COPB1-210ENST00000533533 GK3PQ14409 553 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 KPNB1Q14974 876 aaKnown RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 C3orf36Q3SXR2 165 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 SLC36A3Q495N2 470 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 ZNF770Q6IQ21 691 aaPredicted RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 ZNF627Q7L945 461 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 AMIGO2Q86SJ2 522 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 LINC01356Q8N9X3 169 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 PAPD5Q8NDF8 572 aaKnown RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 ICA1LQ8NDH6 482 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 IL17RDQ8NFM7 739 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 OR2T33Q8NG76 320 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 OR4F15Q8NGB8 312 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 OR8D4Q8NGM9 314 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 AKR7LQ8NHP1 331 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 PYDC1Q8WXC3 89 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 LRTOMTQ8WZ04 291 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 UTP4Q969X6 686 aaKnown RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 NMD3Q96D46 503 aaKnown RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 TSSK2Q96PF2 358 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 RAB3IPQ96QF0 476 aaPredicted RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 DGCR6LQ9BY27 220 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 NUAK2Q9H093 628 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 CDH20Q9HBT6 801 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 RPRD1BQ9NQG5 326 aaKnown RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 B3GNT2Q9NY97 397 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 ZNF224Q9NZL3 707 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 CRNNQ9UBG3 495 aaPredicted RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 FBXO9Q9UK97 447 aaPredicted RBP7.49□□□□□ -1.21
COPB1-210ENST00000533533 FBXL3Q9UKT7 428 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 SPEF1Q9Y4P9 236 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 UGT2A1Q9Y4X1 527 aa7.49□□□□□ -1.21
COPB1-210ENST00000533533 IGHV2OR16-5A0A0B4J2B6 119 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 C12orf71A8MTZ7 269 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 VSTM5A8MXK1 200 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 ARPC3O15145 178 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 IDH3BO43837 385 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 AHCYL1O43865 530 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 MPZL1O95297 269 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 GPANK1O95872 356 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 TXNDC12O95881 172 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 PTHP01270 115 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 IFNGP01579 166 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 IGLV1-44P01699 117 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 SERPINA5P05154 406 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 ERCC1P07992 297 aaPredicted RBP7.48□□□□□ -1.21
COPB1-210ENST00000533533 FCGR1AP12314 374 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 ANXA8P13928 327 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 ZNF14P17017 642 aaPredicted RBP7.48□□□□□ -1.21
COPB1-210ENST00000533533 APEX1P27695 318 aaKnown RBP7.48□□□□□ -1.21
COPB1-210ENST00000533533 CRABP1P29762 137 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 ZNF133P52736 654 aaPredicted RBP7.48□□□□□ -1.21
COPB1-210ENST00000533533 CDH15P55291 814 aa7.48□□□□□ -1.21
COPB1-210ENST00000533533 PCBD1P61457 104 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms