RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RPL3LQ92901 407 aaKnown RBP13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 OXGR1Q96P68 337 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 OPA3Q9H6K4 179 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 TXNL4BQ9NX01 149 aaKnown RBP13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 TRBV5-4A0A0C4DH59 114 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 CTDSP2O14595 271 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 SULT1B1O43704 296 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 PLA2G7Q13093 441 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 PRSS35Q8N3Z0 413 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 ANKRD53Q8N9V6 530 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 OR2A1Q8NGT9 310 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 GALNT9Q9HCQ5 603 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 SCN1AP35498 2009 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 KLK10O43240 276 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 GMDSO60547 372 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 PIGAP37287 484 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 FAPQ12884 760 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 OR2A2Q6IF42 318 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 ANGPTL5Q86XS5 388 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 LACC1Q8IV20 430 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 ARIH2OSQ8N7S6 290 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 RHOXF1Q8NHV9 184 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 TRDV1A0A1B0GX56 115 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 XRCC2O43543 280 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 FCMRO60667 390 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 SDHAP31040 664 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 TGM4P49221 684 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 BHLHA9Q7RTU4 235 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 ZNF321PQ8N8H1 164 aa13.47□□□□□ -0.25
PCDHA9-202ENST00000532602 KNL1Q8NG31 2342 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 PEX11BO96011 259 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 ZNF74Q16587 644 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 NLRC3Q7RTR2 1065 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 OLIG1Q8TAK6 271 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 PLA2G3Q9NZ20 509 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 CLEC2DQ9UHP7 191 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 KCNG2Q9UJ96 466 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 ABCD4O14678 606 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 CLDN15P56746 228 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 ACKR1Q16570 336 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 STEAP1BQ6NZ63 245 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 EGFL6Q8IUX8 553 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 LGI3Q8N145 548 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 CORO2AQ92828 525 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 CLEC1BQ9P126 229 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 FRG2CA6NGY1 282 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 SHISA8B8ZZ34 492 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 RAB27BO00194 218 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 YBX1P67809 324 aaKnown RBP13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 KHDC1LQ5JSQ8 128 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 TMEM102Q8N9M5 508 aaPredicted RBP13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 HAS2Q92819 552 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 FAM212BQ9NTI7 297 aaPredicted RBP13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 CEPT1Q9Y6K0 416 aa13.46□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC22A20A6NK97 555 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 HRO43593 1189 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 NXPH3O95157 252 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 GNB3P16520 340 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 ZNF718Q3SXZ3 478 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 OSGIN1Q9UJX0 560 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 HDGFL3Q9Y3E1 203 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 IGHV1OR15-9A0A0B4J2B8 117 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 BOLA2-SMG1P6H3BVE0 249 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 K7EQS6 105 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 EFSO43281 561 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 PIAS2O75928 621 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 RAF1P04049 648 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 RAB6AP20340 208 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 BAXQ07812 192 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 TCTN3Q6NUS6 607 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 KCNIP4Q6PIL6 250 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 DPPA2Q7Z7J5 298 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 OR52H1Q8NGJ2 320 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 ISYNA1Q9NPH2 558 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 SLC25A37Q9NYZ2 338 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 ASH2LQ9UBL3 628 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 CD300AQ9UGN4 299 aa13.46□□□□□ -0.26
PCDHA9-202ENST00000532602 PHF1O43189 567 aaPredicted RBP13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 CHRNB1P11230 501 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 NME1P15531 152 aaKnown RBP13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 TLE4Q04727 773 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 TMEM81Q6P7N7 255 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 NCCRP1Q6ZVX7 275 aaPredicted RBP13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 LSRQ86X29 649 aaPredicted RBP13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 OR10J5Q8NHC4 309 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 OR5M11Q96RB7 305 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 TEAD3Q99594 435 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 SLC25A21Q9BQT8 299 aaPredicted RBP13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 CNTNAP3Q9BZ76 1288 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 ZNF436Q9C0F3 470 aaPredicted RBP13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 SH2D1BO14796 132 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 NKX6-1P78426 367 aaPredicted RBP13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 FZD2Q14332 565 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 ALKBH6Q3KRA9 238 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 SLAMF6Q96DU3 332 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 RIMS4Q9H426 269 aaPredicted RBP13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 RPS10P5Q9NQ39 176 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 M0R135 149 aa13.45□□□□□ -0.26
PCDHA9-202ENST00000532602 M0R1B8 84 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms