RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 SMN1Q16637 294 aaKnown RBP6.95□□□□□ -1.3
TRIM49-202ENST00000532501 MSMPQ1L6U9 139 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 SLC35D3Q5M8T2 416 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 SLC25A30Q5SVS4 291 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 LCN1P1Q5VSP4 162 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 SP5Q6BEB4 398 aaPredicted RBP6.95□□□□□ -1.3
TRIM49-202ENST00000532501 KRT80Q6KB66 452 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 ANKRD16Q6P6B7 361 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 CFAP77Q6ZQR2 320 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 USP51Q70EK9 711 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 CXXC5Q7LFL8 322 aaKnown RBP6.95□□□□□ -1.3
TRIM49-202ENST00000532501 SHFQ7M4L6 423 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 THAP5Q7Z6K1 395 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 TIGD4Q8IY51 512 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 PAQR4Q8N4S7 273 aaPredicted RBP6.95□□□□□ -1.3
TRIM49-202ENST00000532501 C1orf162Q8NEQ5 155 aaPredicted RBP6.95□□□□□ -1.3
TRIM49-202ENST00000532501 AKR7LQ8NHP1 331 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 SLC7A6Q92536 515 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 OTULINQ96BN8 352 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 LRRC46Q96FV0 321 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 BOD1Q96IK1 185 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 ZNF582Q96NG8 517 aaPredicted RBP6.95□□□□□ -1.3
TRIM49-202ENST00000532501 WNT5BQ9H1J7 359 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 RASSF1Q9NS23 344 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 CLN6Q9NWW5 311 aa6.95□□□□□ -1.3
TRIM49-202ENST00000532501 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRIM49-202ENST00000532501 ARPC4-TTLL3A0A0A6YYG9 625 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 IGHV1-18A0A0C4DH31 117 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 TUBAL3A6NHL2 446 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 RER1O15258 196 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 DENRO43583 198 aaKnown RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 ENTPD6O75354 484 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 IGLV1-44P01699 117 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 MRPL3P09001 348 aaKnown RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 CECR9P0C854 216 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 CCL2P13500 99 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 NPR2P20594 1047 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 MSR1P21757 451 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 CRYGSP22914 178 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 CALCRP30988 508 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 NAA10P41227 235 aaPredicted RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 IDH3GP51553 393 aaPredicted RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 ISL1P61371 349 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 CSNK2BP67870 215 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 GLO1Q04760 184 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 MED21Q13503 144 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 DOC2BQ14184 412 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 RAB39AQ14964 217 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 MAD2L1BPQ15013 274 aaPredicted RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 OCLNQ16625 522 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 TUSC1Q2TAM9 212 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 NRN1LQ496H8 165 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 KLHL12Q53G59 568 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 CCDC92Q53HC0 331 aaPredicted RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 TIMM23BQ5SRD1 257 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 ZNF774Q6NX45 483 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 GLB1L2Q8IW92 636 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 CPEB3Q8NE35 698 aaKnown RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 PROKR2Q8NFJ6 384 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 STEAP2Q8NFT2 490 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 OR6K6Q8NGW6 343 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 RHOXF1Q8NHV9 184 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 CNIH3Q8TBE1 160 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 SGCDQ92629 289 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 MAP6Q96JE9 813 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 MED18Q9BUE0 208 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 TTTY10Q9BZA0 68 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 PNRC2Q9NPJ4 139 aaKnown RBP6.94□□□□□ -1.3
TRIM49-202ENST00000532501 ASH2LQ9UBL3 628 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 KCNG2Q9UJ96 466 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 COPS3Q9UNS2 423 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 LRRC42Q9Y546 428 aa6.94□□□□□ -1.3
TRIM49-202ENST00000532501 TACC2O95359 2948 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 LOC100509620A0A075B734 347 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 IRGMA1A4Y4 181 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 MAGEB4O15481 346 aaPredicted RBP6.93□□□□□ -1.3
TRIM49-202ENST00000532501 GLCEO94923 617 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 FARS2O95363 451 aaKnown RBP6.93□□□□□ -1.3
TRIM49-202ENST00000532501 HRGP04196 525 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 DBHP09172 617 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 CD79AP11912 226 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 ZNF14P17017 642 aaPredicted RBP6.93□□□□□ -1.3
TRIM49-202ENST00000532501 FMO3P31513 532 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 KIR2DL3P43628 341 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 CAPZA2P47755 286 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 CDH11P55287 796 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 CXCR4P61073 352 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 RPS7P62081 194 aaKnown RBP6.93□□□□□ -1.3
TRIM49-202ENST00000532501 PSG4Q00888 419 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 HSF2Q03933 536 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 PPA1Q15181 289 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 KCNMB1Q16558 191 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 RSPO1Q2MKA7 263 aaPredicted RBP6.93□□□□□ -1.3
TRIM49-202ENST00000532501 PABPC1L2AQ5JQF8 200 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 TMEM255AQ5JRV8 349 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 C1QTNF12Q5T7M4 302 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 FAM27BQ5VT28 67 aa6.93□□□□□ -1.3
TRIM49-202ENST00000532501 SLC18B1Q6NT16 456 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms