RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 MMP26Q9NRE1 261 aa13.42□□□□□ -0.26
NXF1-213ENST00000532297 PCNX3Q9H6A9 2034 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 LOC100509620A0A075B734 347 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 TRBV5-7A0A0A0MS05 114 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 DCTN6O00399 190 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 F13BP05160 661 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 DCNP07585 359 aaKnown RBP13.41□□□□□ -0.26
NXF1-213ENST00000532297 S1PR1P21453 382 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 AQP2P41181 271 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 AIMP2Q13155 320 aaKnown RBP13.41□□□□□ -0.26
NXF1-213ENST00000532297 RBM39Q14498 530 aaKnown RBP13.41□□□□□ -0.26
NXF1-213ENST00000532297 GFOD2Q3B7J2 385 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 ULK3Q6PHR2 472 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 MISPQ8IVT2 679 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 BAHD1Q8TBE0 780 aaPredicted RBP13.41□□□□□ -0.26
NXF1-213ENST00000532297 GPR148Q8TDV2 347 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 CTHRC1Q96CG8 243 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 SELENOIQ9C0D9 397 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 MYOZ1Q9NP98 299 aaPredicted RBP13.41□□□□□ -0.26
NXF1-213ENST00000532297 TMEM100Q9NV29 134 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 SEC16AO15027 2179 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 PCDH15Q96QU1 1955 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 ZNF208O43345 1280 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 ZNF28P17035 718 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 AVPR2P30518 371 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 DLX2Q07687 328 aaPredicted RBP13.41□□□□□ -0.26
NXF1-213ENST00000532297 ZNHIT3Q15649 155 aaPredicted RBP13.41□□□□□ -0.26
NXF1-213ENST00000532297 RAB11BQ15907 218 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 Q6ZSR6 202 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 RHOUQ7L0Q8 258 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 SLC16A9Q7RTY1 509 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 NAA40Q86UY6 237 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 ZNF321PQ8N8H1 164 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 STOML3Q8TAV4 291 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 PHOSPHO1Q8TCT1 267 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 MRGPRX1Q96LB2 322 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 MKKSQ9NPJ1 570 aaPredicted RBP13.41□□□□□ -0.26
NXF1-213ENST00000532297 MIOXQ9UGB7 285 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 PCOLCE2Q9UKZ9 415 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 LRP4O75096 1905 aa13.41□□□□□ -0.26
NXF1-213ENST00000532297 A0A0B4J2A0 478 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 LOC100289279A0A1B0GTE1 492 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 C5orf52A6NGY3 159 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 OR4C45A6NMZ5 311 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 NUDT19A8MXV4 375 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 EEF1E1-BLOC1S5C9J1V9 151 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 CYB5AP00167 134 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 PTAFRP25105 342 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 NKPD1Q17RQ9 610 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 EIF2S3LQ2VIR3 472 aaKnown RBP13.4□□□□□ -0.26
NXF1-213ENST00000532297 AKIRIN2Q53H80 203 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 C5orf46Q6UWT4 87 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 BAP18Q8IXM2 172 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 ZNF595Q8IYB9 648 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 C10orf53Q8N6V4 93 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 OR2G2Q8NGZ5 317 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 TSEN15Q8WW01 171 aaKnown RBP13.4□□□□□ -0.26
NXF1-213ENST00000532297 MOGAT1Q96PD6 335 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 LMAN2LQ9H0V9 348 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 SEMA6CQ9H3T2 930 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 ZMAT3Q9HA38 289 aaKnown RBP13.4□□□□□ -0.26
NXF1-213ENST00000532297 ACKR4Q9NPB9 350 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 SHPKQ9UHJ6 478 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 TRBV23-1A0A0A0MS06 115 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 C1orf196B1AJZ1 125 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 ZNF736B4DX44 427 aaPredicted RBP13.4□□□□□ -0.26
NXF1-213ENST00000532297 ZNF735P0CB33 412 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 CDKN2AP42771 156 aaKnown RBP13.4□□□□□ -0.26
NXF1-213ENST00000532297 PPM1FP49593 454 aaPredicted RBP13.4□□□□□ -0.26
NXF1-213ENST00000532297 OR4K17Q8NGC6 315 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 OR13C8Q8NGS7 320 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 FBXO17Q96EF6 278 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 RBM18Q96H35 190 aaKnown RBP13.4□□□□□ -0.26
NXF1-213ENST00000532297 SLC6A7Q99884 636 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 NRIP2Q9BQI9 281 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 TMEM106CQ9BVX2 250 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 MSRAQ9UJ68 235 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 VSIG4Q9Y279 399 aa13.4□□□□□ -0.26
NXF1-213ENST00000532297 ELOA3DA6NLF2 546 aaPredicted RBP13.39□□□□□ -0.27
NXF1-213ENST00000532297 ZNF432O94892 652 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 ABHD16AO95870 558 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 CD74P04233 296 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 ABCD3P28288 659 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 PJVKQ0ZLH3 352 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 PPP1R1AQ13522 171 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 ELOA3BQ3SY89 546 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 CBLN3Q6UW01 205 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 KCTD9Q7L273 389 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 CD163Q86VB7 1156 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 TMEM200AQ86VY9 491 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 ELOA3Q8NG57 546 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 FOXRED1Q96CU9 486 aaPredicted RBP13.39□□□□□ -0.27
NXF1-213ENST00000532297 EDEM2Q9BV94 578 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 OR51M1Q9H341 326 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 HRH4Q9H3N8 390 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 RCC2Q9P258 522 aaKnown RBP13.39□□□□□ -0.27
NXF1-213ENST00000532297 B4DGG1 531 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 UBE2CO00762 179 aa13.39□□□□□ -0.27
NXF1-213ENST00000532297 ARPC3O15145 178 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms