RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MTX3Q5HYI7 312 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 ZER1Q7Z7L7 766 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 CYP4Z1Q86W10 505 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 NPEPL1Q8NDH3 523 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 Q96M85 177 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 ZNF570Q96NI8 536 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 GAL3ST1Q99999 423 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 NDEL1Q9GZM8 345 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 NMNAT1Q9HAN9 279 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-207ENST00000531727 MSL2Q9HCI7 577 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 EMC7Q9NPA0 242 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 TBCCD1Q9NVR7 557 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 TMEM5Q9Y2B1 443 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 ENPP4Q9Y6X5 453 aa14.26□□□□□ -0.13
CPSF1-207ENST00000531727 PRSS37A4D1T9 235 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 J3QLI3 93 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 TIMM8AO60220 97 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-207ENST00000531727 DOK2O60496 412 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 CCDC22O60826 627 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 ABHD16AO95870 558 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 GSTM3P21266 225 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 TUBG1P23258 451 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 SCRN3Q0VDG4 424 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 PSG7Q13046 419 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 SPRNQ5BIV9 151 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 DCAF12L2Q5VW00 463 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 RRM2BQ7LG56 351 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 C1QL2Q7Z5L3 287 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 TSEN54Q7Z6J9 526 aaKnown RBP14.25□□□□□ -0.13
CPSF1-207ENST00000531727 SLC7A13Q8TCU3 470 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 FAM162AQ96A26 154 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 EFCAB1Q9HAE3 211 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 TUBG2Q9NRH3 451 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 ZNF446Q9NWS9 450 aa14.25□□□□□ -0.13
CPSF1-207ENST00000531727 TEX13CA0A0J9YWL9 993 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 ISPDA4D126 451 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 NDUFAB1O14561 156 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 SGCEO43556 437 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 RGS9O75916 674 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-207ENST00000531727 CTLA4P16410 223 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 GATA3P23771 443 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 HTR5AP47898 357 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 TNFAIP6P98066 277 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-207ENST00000531727 CDK5R2Q13319 367 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 C12orf54Q6X4T0 127 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 HACD2Q6Y1H2 254 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 USP43Q70EL4 1123 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 VASH1Q7L8A9 365 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-207ENST00000531727 PEG10Q86TG7 708 aaKnown RBP14.24□□□□□ -0.13
CPSF1-207ENST00000531727 FAM46AQ96IP4 442 aaKnown RBP14.24□□□□□ -0.13
CPSF1-207ENST00000531727 POFUT1Q9H488 388 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 PCDHB10Q9UN67 800 aa14.24□□□□□ -0.13
CPSF1-207ENST00000531727 A0A1W2PRQ8 180 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 PTP4A3O75365 173 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 H1F0P07305 194 aaKnown RBP14.23□□□□□ -0.13
CPSF1-207ENST00000531727 NCK1P16333 377 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 KITLGP21583 273 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 SDHAP31040 664 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 LIMS1P48059 325 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 NUDT2P50583 147 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 HILS1P60008 231 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 AQP6Q13520 282 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 KRR1Q13601 381 aaKnown RBP14.23□□□□□ -0.13
CPSF1-207ENST00000531727 DGCR6Q14129 220 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 ZNF771Q7L3S4 317 aaPredicted RBP14.23□□□□□ -0.13
CPSF1-207ENST00000531727 TREML1Q86YW5 311 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 RASD2Q96D21 266 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 KCTD14Q9BQ13 255 aaPredicted RBP14.23□□□□□ -0.13
CPSF1-207ENST00000531727 UBAP1Q9NZ09 502 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 PURGQ9UJV8 347 aaKnown RBP14.23□□□□□ -0.13
CPSF1-207ENST00000531727 RPS6KA6Q9UK32 745 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 SIGLEC7Q9Y286 467 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 NPTNQ9Y639 398 aa14.23□□□□□ -0.13
CPSF1-207ENST00000531727 NDUFB2O95178 105 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 IGHV2-70P01814 119 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 TNFSF4P23510 183 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 LSM6P62312 80 aaKnown RBP14.22□□□□□ -0.13
CPSF1-207ENST00000531727 LCN2P80188 198 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 GPR139Q6DWJ6 353 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 Q6ZR03 302 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 GLB1L2Q8IW92 636 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 NANPQ8TBE9 248 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 ST7LQ8TDW4 575 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 SAMD8Q96LT4 415 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 COG8Q96MW5 612 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 GPX7Q96SL4 187 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-207ENST00000531727 SYT4Q9H2B2 425 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 NRIP3Q9NQ35 241 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 TMEM106BQ9NUM4 274 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 DCAF16Q9NXF7 216 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 PLEK2Q9NYT0 353 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 VSX1Q9NZR4 365 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-207ENST00000531727 ABCD2Q9UBJ2 740 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 STARD10Q9Y365 291 aa14.22□□□□□ -0.13
CPSF1-207ENST00000531727 FAM32AQ9Y421 112 aaKnown RBP14.22□□□□□ -0.13
CPSF1-207ENST00000531727 SLC16A7O60669 478 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 KHDRBS3O75525 346 aaKnown RBP14.21□□□□□ -0.13
CPSF1-207ENST00000531727 RHCEP18577 417 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 ADRA2CP18825 462 aa14.21□□□□□ -0.13
CPSF1-207ENST00000531727 MDH1P40925 334 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms