RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SLC3A1Q07837 685 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 PSG7Q13046 419 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 SPRNQ5BIV9 151 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 ZMAT1Q5H9K5 638 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 RRM2BQ7LG56 351 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 FAM122BQ7Z309 247 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 TSEN54Q7Z6J9 526 aaKnown RBP13.37□□□□□ -0.27
CPSF1-205ENST00000531042 OR4M2Q8NGB6 313 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 ZNF418Q8TF45 676 aaPredicted RBP13.37□□□□□ -0.27
CPSF1-205ENST00000531042 ANKRD19PQ9H560 264 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 EFCAB1Q9HAE3 211 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 NMNAT1Q9HAN9 279 aaPredicted RBP13.37□□□□□ -0.27
CPSF1-205ENST00000531042 MSL2Q9HCI7 577 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 TBCCD1Q9NVR7 557 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 ENPP4Q9Y6X5 453 aa13.37□□□□□ -0.27
CPSF1-205ENST00000531042 PRSS37A4D1T9 235 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 J3QLI3 93 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 TIMM8AO60220 97 aaPredicted RBP13.36□□□□□ -0.27
CPSF1-205ENST00000531042 CCDC22O60826 627 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 PTP4A3O75365 173 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 ABHD16AO95870 558 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 EPHA1P21709 976 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 TUBG1P23258 451 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 SCRN3Q0VDG4 424 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 CDK5R2Q13319 367 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 MTX3Q5HYI7 312 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 DCAF12L2Q5VW00 463 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 HACD2Q6Y1H2 254 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 C1QL2Q7Z5L3 287 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 ZER1Q7Z7L7 766 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 CYP4Z1Q86W10 505 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 TREML1Q86YW5 311 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 NPEPL1Q8NDH3 523 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 SLC7A13Q8TCU3 470 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 FAM162AQ96A26 154 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 ZNF570Q96NI8 536 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 GAL3ST1Q99999 423 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 POFUT1Q9H488 388 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 TUBG2Q9NRH3 451 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 PCDHB10Q9UN67 800 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 TMEM5Q9Y2B1 443 aa13.36□□□□□ -0.27
CPSF1-205ENST00000531042 TEX13CA0A0J9YWL9 993 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 ISPDA4D126 451 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 NDUFAB1O14561 156 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 SGCEO43556 437 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 DOK2O60496 412 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 RGS9O75916 674 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-205ENST00000531042 NCK1P16333 377 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 CTLA4P16410 223 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 GSTM3P21266 225 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 GATA3P23771 443 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 HTR5AP47898 357 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 TNFAIP6P98066 277 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-205ENST00000531042 C12orf54Q6X4T0 127 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 USP43Q70EL4 1123 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 ZNF771Q7L3S4 317 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-205ENST00000531042 VASH1Q7L8A9 365 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-205ENST00000531042 PEG10Q86TG7 708 aaKnown RBP13.35□□□□□ -0.27
CPSF1-205ENST00000531042 RASD2Q96D21 266 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 FAM46AQ96IP4 442 aaKnown RBP13.35□□□□□ -0.27
CPSF1-205ENST00000531042 KCTD14Q9BQ13 255 aaPredicted RBP13.35□□□□□ -0.27
CPSF1-205ENST00000531042 NDEL1Q9GZM8 345 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 PURGQ9UJV8 347 aaKnown RBP13.35□□□□□ -0.27
CPSF1-205ENST00000531042 NPTNQ9Y639 398 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 DYSFO75923 2080 aa13.35□□□□□ -0.27
CPSF1-205ENST00000531042 A0A1W2PRQ8 180 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 NDUFB2O95178 105 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 H1F0P07305 194 aaKnown RBP13.34□□□□□ -0.27
CPSF1-205ENST00000531042 KITLGP21583 273 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 SDHAP31040 664 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 LIMS1P48059 325 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 HILS1P60008 231 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 HNRNPA0Q13151 305 aaKnown RBP13.34□□□□□ -0.27
CPSF1-205ENST00000531042 AQP6Q13520 282 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 KRR1Q13601 381 aaKnown RBP13.34□□□□□ -0.27
CPSF1-205ENST00000531042 DGCR6Q14129 220 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 GPR139Q6DWJ6 353 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 Q6ZR03 302 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 NANPQ8TBE9 248 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 CMBLQ96DG6 245 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 GPX7Q96SL4 187 aaPredicted RBP13.34□□□□□ -0.27
CPSF1-205ENST00000531042 NRIP3Q9NQ35 241 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 DCAF16Q9NXF7 216 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 UBAP1Q9NZ09 502 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 ABCD2Q9UBJ2 740 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 RPS6KA6Q9UK32 745 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 SIGLEC7Q9Y286 467 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 COA3Q9Y2R0 106 aaPredicted RBP13.34□□□□□ -0.27
CPSF1-205ENST00000531042 STARD10Q9Y365 291 aa13.34□□□□□ -0.27
CPSF1-205ENST00000531042 ARHGAP32A7KAX9 2087 aa13.33□□□□□ -0.27
CPSF1-205ENST00000531042 WNK2Q9Y3S1 2297 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 SLC16A7O60669 478 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 KHDRBS3O75525 346 aaKnown RBP13.33□□□□□ -0.28
CPSF1-205ENST00000531042 IGHV2-70P01814 119 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 ADRA2CP18825 462 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 TNFSF4P23510 183 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 MDH1P40925 334 aaKnown RBP13.33□□□□□ -0.28
CPSF1-205ENST00000531042 OMPP47874 163 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 NUDT2P50583 147 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms