RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CPEB3Q8NE35 698 aaKnown RBP13.25□□□□□ -0.29
CCS-206ENST00000530961 NUP37Q8NFH4 326 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 OR51L1Q8NGJ5 315 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 OR6K6Q8NGW6 343 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 OR2AJ1Q8NGZ0 328 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 ZNRF4Q8WWF5 429 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 TRUB1Q8WWH5 349 aaKnown RBP13.25□□□□□ -0.29
CCS-206ENST00000530961 FBXW5Q969U6 566 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 HCAR1Q9BXC0 346 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 WNT5BQ9H1J7 359 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 MED20Q9H944 212 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 UBTD1Q9HAC8 227 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 FAIMQ9NVQ4 179 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 MRPL22Q9NWU5 206 aaKnown RBP13.25□□□□□ -0.29
CCS-206ENST00000530961 CYB5R1Q9UHQ9 305 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 NDRG4Q9ULP0 352 aaKnown RBP13.25□□□□□ -0.29
CCS-206ENST00000530961 ATP23Q9Y6H3 246 aa13.25□□□□□ -0.29
CCS-206ENST00000530961 ATP6V1G2-DDX39BF2Z307 99 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 SGCEO43556 437 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 CD99P14209 185 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 CALCRP30988 508 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 GDI2P50395 445 aaKnown RBP13.24□□□□□ -0.29
CCS-206ENST00000530961 HIST1H3AP68431 136 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 ADAM8P78325 824 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 GALK2Q01415 458 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 SLC34A1Q06495 639 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 SPOCK1Q08629 439 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 DBPQ10586 325 aaPredicted RBP13.24□□□□□ -0.29
CCS-206ENST00000530961 MEP1BQ16820 701 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 PCK2Q16822 640 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 KLHL12Q53G59 568 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 TEX30Q5JUR7 227 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 HIST2H3PS2Q5TEC6 136 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 ZNF544Q6NX49 715 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.24□□□□□ -0.29
CCS-206ENST00000530961 TCEANCQ8N8B7 351 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 OR8J1Q8NGP2 316 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 AKR7LQ8NHP1 331 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 SPATA3Q8NHX4 192 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 TMEM163Q8TC26 289 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 DHRS9Q9BPW9 319 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 TOR3AQ9H497 397 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 CDH20Q9HBT6 801 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 PLEK2Q9NYT0 353 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 H2AFY2Q9P0M6 372 aaPredicted RBP13.24□□□□□ -0.29
CCS-206ENST00000530961 ATPIF1Q9UII2 106 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 LHFPL6Q9Y693 200 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 MPDZO75970 2070 aa13.24□□□□□ -0.29
CCS-206ENST00000530961 ALPK2Q86TB3 2170 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 TVP23AA6NH52 213 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 E7EQL1 145 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 E9PQ18 207 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 ZNF593O00488 134 aaPredicted RBP13.23□□□□□ -0.29
CCS-206ENST00000530961 RER1O15258 196 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 NR4A1P22736 598 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 APEX1P27695 318 aaKnown RBP13.23□□□□□ -0.29
CCS-206ENST00000530961 PCSK6P29122 969 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 APOBEC3AP31941 199 aaPredicted RBP13.23□□□□□ -0.29
CCS-206ENST00000530961 ENTPD1P49961 510 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 HGFACQ04756 655 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 RAB35Q15286 201 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 LRRC36Q1X8D7 754 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 ZIK1Q3SY52 487 aaPredicted RBP13.23□□□□□ -0.29
CCS-206ENST00000530961 NXNL2Q5VZ03 156 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 OTPQ5XKR4 325 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 SLC18B1Q6NT16 456 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 ZNF774Q6NX45 483 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 PAMR1Q6UXH9 720 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 UNQ6126/PRO20091Q6UXV3 157 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 VASH1Q7L8A9 365 aaPredicted RBP13.23□□□□□ -0.29
CCS-206ENST00000530961 CDH24Q86UP0 819 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 ZNF511Q8NB15 262 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 SMAP2Q8WU79 429 aaPredicted RBP13.23□□□□□ -0.29
CCS-206ENST00000530961 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 NINJ1Q92982 152 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 POM121L2Q96KW2 1035 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 MARCH7Q9H992 704 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 RNPEPL1Q9HAU8 725 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 CA10Q9NS85 328 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 IMPAD1Q9NX62 359 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 SMPD3Q9NY59 655 aaPredicted RBP13.23□□□□□ -0.29
CCS-206ENST00000530961 ST6GALNAC2Q9UJ37 374 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 COMMD3-BMI1R4GMX3 469 aa13.23□□□□□ -0.29
CCS-206ENST00000530961 SYNGR3O43761 229 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 DOK2O60496 412 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 RAF1P04049 648 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 SLC2A5P22732 501 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 PEX2P28328 305 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 RAD52P43351 418 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 RPS7P62081 194 aaKnown RBP13.22□□□□□ -0.29
CCS-206ENST00000530961 NKX6-1P78426 367 aaPredicted RBP13.22□□□□□ -0.29
CCS-206ENST00000530961 ECH1Q13011 328 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 APOFQ13790 326 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 KEAP1Q14145 624 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 CCDC92Q53HC0 331 aaPredicted RBP13.22□□□□□ -0.29
CCS-206ENST00000530961 ELFN2Q5R3F8 820 aa13.22□□□□□ -0.29
CCS-206ENST00000530961 OGFRL1Q5TC84 451 aaPredicted RBP13.22□□□□□ -0.29
CCS-206ENST00000530961 LCN1P1Q5VSP4 162 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms