RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 GJC3Q8NFK1 279 aa12.91□□□□□ -0.34
SRPRA-204ENST00000530680 OR1J2Q8NGS2 313 aa12.91□□□□□ -0.34
SRPRA-204ENST00000530680 TRUB1Q8WWH5 349 aaKnown RBP12.91□□□□□ -0.34
SRPRA-204ENST00000530680 FBXO17Q96EF6 278 aa12.91□□□□□ -0.34
SRPRA-204ENST00000530680 Q96MT0 163 aa12.91□□□□□ -0.34
SRPRA-204ENST00000530680 PITX2Q99697 317 aa12.91□□□□□ -0.34
SRPRA-204ENST00000530680 OR2H1Q9GZK4 316 aa12.91□□□□□ -0.34
SRPRA-204ENST00000530680 CLN6Q9NWW5 311 aa12.91□□□□□ -0.34
SRPRA-204ENST00000530680 NDRG4Q9ULP0 352 aaKnown RBP12.91□□□□□ -0.34
SRPRA-204ENST00000530680 NF1P21359 2839 aa12.91□□□□□ -0.34
SRPRA-204ENST00000530680 IGHV1-18A0A0C4DH31 117 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 ZNF503-AS2A6NEH8 195 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 SLC16A6O15403 523 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 IGKV3-15P01624 115 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 TFP02787 698 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 CELA3BP08861 270 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 MRPL3P09001 348 aaKnown RBP12.9□□□□□ -0.34
SRPRA-204ENST00000530680 CECR9P0C854 216 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 CCNOP22674 350 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 CD40P25942 277 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 CAPGP40121 348 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 VHLP40337 213 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 HSPA13P48723 471 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 GDI2P50395 445 aaKnown RBP12.9□□□□□ -0.34
SRPRA-204ENST00000530680 AQP4P55087 323 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 TAF13Q15543 124 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 SNCBQ16143 134 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 KCNMB1Q16558 191 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 C3orf36Q3SXR2 165 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 NCMAPQ5T1S8 102 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 MEDAGQ5VYS4 303 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 IZUMO2Q6UXV1 221 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 MEPCEQ7L2J0 689 aaKnown RBP12.9□□□□□ -0.34
SRPRA-204ENST00000530680 FAM169BQ8N8A8 192 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 IL17RDQ8NFM7 739 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 AKR7LQ8NHP1 331 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 NRG4Q8WWG1 115 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 CNN2Q99439 309 aaKnown RBP12.9□□□□□ -0.34
SRPRA-204ENST00000530680 DDOQ99489 341 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 CLEC4MQ9H2X3 399 aaPredicted RBP12.9□□□□□ -0.34
SRPRA-204ENST00000530680 NOX3Q9HBY0 568 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 B3GNT2Q9NY97 397 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 ZNF224Q9NZL3 707 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 ITGB1BP2Q9UKP3 347 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.9□□□□□ -0.34
SRPRA-204ENST00000530680 SPEF1Q9Y4P9 236 aa12.9□□□□□ -0.34
SRPRA-204ENST00000530680 PRR14LQ5THK1 2151 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 DEFB108AA8MXU0 73 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 H0YAE9 185 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 ZNF593O00488 134 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 SERPINA5P05154 406 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 SCG5P05408 212 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 MMP7P09237 267 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 IL18R1Q13478 541 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 EIF2B1Q14232 305 aaKnown RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 RAB35Q15286 201 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 ZNF774Q6NX45 483 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 CORO6Q6QEF8 472 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 LYPD4Q6UWN0 246 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 ZNF704Q6ZNC4 412 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 SHFQ7M4L6 423 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 BCDIN3DQ7Z5W3 292 aaKnown RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 C8orf59Q8N0T1 100 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 FGFBP3Q8TAT2 258 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 PTP4A1Q93096 173 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 C14orf79Q96F83 325 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 MS4A3Q96HJ5 214 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 HDHD2Q9H0R4 259 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 WDR76Q9H967 626 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 MRPL22Q9NWU5 206 aaKnown RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 CRNNQ9UBG3 495 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 WARS2Q9UGM6 360 aaKnown RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 LAMP5Q9UJQ1 280 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 GDF2Q9UK05 429 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-204ENST00000530680 LHFPL6Q9Y693 200 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 ATP23Q9Y6H3 246 aa12.89□□□□□ -0.35
SRPRA-204ENST00000530680 H0YJX3 145 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 SELENOFO60613 162 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 IGLV1-44P01699 117 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 ZNF14P17017 642 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-204ENST00000530680 SLC2A5P22732 501 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 STOMP27105 288 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 APEX1P27695 318 aaKnown RBP12.88□□□□□ -0.35
SRPRA-204ENST00000530680 RPS27P42677 84 aaKnown RBP12.88□□□□□ -0.35
SRPRA-204ENST00000530680 SNRPGP62308 76 aaKnown RBP12.88□□□□□ -0.35
SRPRA-204ENST00000530680 PSG4Q00888 419 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 NAAAQ02083 359 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 SPOCK1Q08629 439 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 POU4F2Q12837 409 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 LINC01590Q5TEZ4 76 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 ARL9Q6T311 187 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 UNQ6126/PRO20091Q6UXV3 157 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 DCXRQ7Z4W1 244 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 ENTHD1Q8IYW4 607 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 KBTBD8Q8NFY9 601 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 ZNRF4Q8WWF5 429 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 ZNF582Q96NG8 517 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-204ENST00000530680 TEAD3Q99594 435 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 COPS4Q9BT78 406 aa12.88□□□□□ -0.35
SRPRA-204ENST00000530680 UBTD1Q9HAC8 227 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms