RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 C10orf128Q5T292 105 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 C1orf185Q5T7R7 199 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 NSUN5P2Q63ZY6 315 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 KCTD18Q6PI47 426 aaPredicted RBP12.71□□□□□ -0.38
TTC39A-216ENST00000530004 C3P1Q6ZMU1 363 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 TMEM91Q6ZNR0 172 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 SPATC1Q76KD6 591 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 AAED1Q7RTV5 226 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 DCXRQ7Z4W1 244 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF679Q8IYX0 411 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 GALNT11Q8NCW6 608 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 OR52N5Q8NH56 324 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 RNF128Q8TEB7 428 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 RNF166Q96A37 237 aaPredicted RBP12.71□□□□□ -0.38
TTC39A-216ENST00000530004 PRRG4Q9BZD6 226 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 ULBP2Q9BZM5 246 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 SLIRPQ9GZT3 109 aaKnown RBP12.71□□□□□ -0.38
TTC39A-216ENST00000530004 CALHM2Q9HA72 323 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 GALNT8Q9NY28 637 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 UGT2A1Q9Y4X1 527 aa12.71□□□□□ -0.38
TTC39A-216ENST00000530004 IGKV3D-15A0A087WSY6 115 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 WNT11O96014 354 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 GALP22466 123 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 NANOS3P60323 173 aaKnown RBP12.7□□□□□ -0.38
TTC39A-216ENST00000530004 ROM1Q03395 351 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 IGFBP7Q16270 282 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 CORO6Q6QEF8 472 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 KRT77Q7Z794 578 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 RPRMLQ8N4K4 120 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 TBC1D15Q8TC07 691 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 HAVCR2Q8TDQ0 301 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 HSD17B8Q92506 261 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 HTRA1Q92743 480 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 WNT2BQ93097 391 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 MROQ9BYG7 248 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 ELOVL3Q9HB03 270 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 EMC7Q9NPA0 242 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 CCDC59Q9P031 241 aaKnown RBP12.7□□□□□ -0.38
TTC39A-216ENST00000530004 CYB5R1Q9UHQ9 305 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 SH3BGRL2Q9UJC5 107 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 PMF1-BGLAPU3KQ54 211 aa12.7□□□□□ -0.38
TTC39A-216ENST00000530004 HSPB2A8KAH6 182 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 VGLL3A8MV65 326 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 CDRT1O95170 752 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 CD1AP06126 327 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 FCGR2AP12318 317 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 RPS19P39019 145 aaKnown RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 CA7P43166 264 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 CASP6P55212 293 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 GTF3C1Q12789 2109 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 HSPB2Q16082 182 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 SEM1Q6ZVN7 128 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 MS4A15Q8N5U1 240 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 ABHD4Q8TB40 342 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 RPS4Y2Q8TD47 263 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 ST7LQ8TDW4 575 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 TMEM45BQ96B21 275 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 PDCD1LG2Q9BQ51 273 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 RBM24Q9BX46 236 aaKnown RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 KCNN2Q9H2S1 579 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 POLE4Q9NR33 117 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 OSGIN2Q9Y236 505 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 POLR1DQ9Y2S0 133 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 TRGV8A0A0C4DH27 118 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 MBD3L4A6NDZ8 208 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 MBD3L3A6NE82 208 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 MBD3L5A6NJ08 208 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 GPR171O14626 319 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 DVL2O14641 736 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 DHHO43323 396 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 GUCA1AP43080 201 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 RIDAP52758 137 aaKnown RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 MXD1Q05195 221 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 KCNMB1Q16558 191 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 OR7E24Q6IFN5 339 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 P4HA3Q7Z4N8 544 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 OR13C5Q8NGS8 318 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 MBD3L2Q8NHZ7 208 aaPredicted RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 RNF122Q9H9V4 155 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 SNTG1Q9NSN8 517 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 EMC3Q9P0I2 261 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 FRRS1LQ9P0K9 344 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 NOSIPQ9Y314 301 aaKnown RBP12.69□□□□□ -0.38
TTC39A-216ENST00000530004 LRP12Q9Y561 859 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 LHFPL6Q9Y693 200 aa12.69□□□□□ -0.38
TTC39A-216ENST00000530004 ZGRF1Q86YA3 2104 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 FAM208BQ5VWN6 2430 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 KALRNO60229 2985 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 GPRIN2O60269 458 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 IL1AP01583 271 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 SDC2P34741 201 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 SOX6P35712 828 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 ZNF84P51523 738 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 RNPS1Q15287 305 aaKnown RBP12.68□□□□□ -0.38
TTC39A-216ENST00000530004 SGCAQ16586 387 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 ACSM3Q53FZ2 586 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 FOXL2NBQ6ZUU3 175 aa12.68□□□□□ -0.38
TTC39A-216ENST00000530004 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.68□□□□□ -0.38
TTC39A-216ENST00000530004 CEACAM19Q7Z692 300 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms