RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MCIDASD6RGH6 385 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 H7C417 338 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 hCG_2039718K7EN88 272 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF701M0R085 212 aaPredicted RBP7.27□□□□□ -1.25
SSBP3-212ENST00000528930 GMNNO75496 209 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 KRT36O76013 467 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 SLC2A10O95528 541 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 OR8G3PP0DMU2 310 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 SAGP10523 405 aaPredicted RBP7.27□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF35P13682 527 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 GPR4P46093 362 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 OMPP47874 163 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 LIMS1P48059 325 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 GIPRP48546 466 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 CHN2P52757 468 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 CLRN1P58418 232 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 DSCR9P59020 149 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 CTXN1P60606 82 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 RPL27P61353 136 aaKnown RBP7.27□□□□□ -1.25
SSBP3-212ENST00000528930 FMODQ06828 376 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 NPRL3Q12980 569 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 DCTN2Q13561 401 aaKnown RBP7.27□□□□□ -1.25
SSBP3-212ENST00000528930 SEC23BQ15437 767 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 ADIPOQQ15848 244 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 SPATS1Q496A3 300 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 NRN1LQ496H8 165 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 SLC25A47Q6Q0C1 308 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF730Q6ZMV8 503 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF554Q86TJ5 538 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 OAFQ86UD1 273 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 IGFN1Q86VF2 1251 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 CYP4Z1Q86W10 505 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 SPATA24Q86W54 205 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 CLDN22Q8N7P3 220 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 NUP37Q8NFH4 326 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 IL17RDQ8NFM7 739 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 OR4K5Q8NGD3 323 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 OR13C2Q8NGS9 318 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF519Q8TB69 540 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 FBXO17Q96EF6 278 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 TSPAN32Q96QS1 320 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 KCNS3Q9BQ31 491 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 S100A14Q9HCY8 104 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 MAGEL2Q9UJ55 1249 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 PAIP2BQ9ULR5 123 aaKnown RBP7.27□□□□□ -1.25
SSBP3-212ENST00000528930 RAB26Q9ULW5 256 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 UGT2A1Q9Y4X1 527 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 V9GYQ6 96 aa7.27□□□□□ -1.25
SSBP3-212ENST00000528930 DYNC2H1Q8NCM8 4307 aaKnown RBP7.27□□□□□ -1.25
SSBP3-212ENST00000528930 B9A039 149 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 H3BNX3 289 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 TRIM77I1YAP6 450 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 SSX4O60224 188 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 PFDN1O60925 122 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 E2F6O75461 281 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 PDE5AO76074 875 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 UBL3O95164 117 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 IGFBP1P08833 259 aaPredicted RBP7.26□□□□□ -1.25
SSBP3-212ENST00000528930 MMP7P09237 267 aaPredicted RBP7.26□□□□□ -1.25
SSBP3-212ENST00000528930 OR4A8P0C604 315 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 NR4A1P22736 598 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 ZFP36P26651 326 aaKnown RBP7.26□□□□□ -1.25
SSBP3-212ENST00000528930 THBS4P35443 961 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 SERPINF1P36955 418 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 FXYD6P3P58550 94 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 HILS1P60008 231 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 MRPS34P82930 218 aaKnown RBP7.26□□□□□ -1.25
SSBP3-212ENST00000528930 COL10A1Q03692 680 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 CHRNB3Q05901 458 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 TOP3AQ13472 1001 aaPredicted RBP7.26□□□□□ -1.25
SSBP3-212ENST00000528930 RAB39AQ14964 217 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 EFNB3Q15768 340 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 ZBED5Q49AG3 693 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 PGM2L1Q6PCE3 622 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 VHLLQ6RSH7 139 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 CLEC2AQ6UVW9 174 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 RINLQ6ZS11 566 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 RRM2BQ7LG56 351 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 FAM122BQ7Z309 247 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 HDDC2Q7Z4H3 204 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 ZER1Q7Z7L7 766 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 PEG10Q86TG7 708 aaKnown RBP7.26□□□□□ -1.25
SSBP3-212ENST00000528930 CDK20Q8IZL9 346 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 OR52J3Q8NH60 311 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 NABP1Q96AH0 204 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 NSMCE2Q96MF7 247 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 DOK1Q99704 481 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 GPA33Q99795 319 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 ALG12Q9BV10 488 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 MRPS26Q9BYN8 205 aaKnown RBP7.26□□□□□ -1.25
SSBP3-212ENST00000528930 PLK3Q9H4B4 646 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 ZNF442Q9H7R0 627 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 SMURF2Q9HAU4 748 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 SIGLEC7Q9Y286 467 aa7.26□□□□□ -1.25
SSBP3-212ENST00000528930 FAM32AQ9Y421 112 aaKnown RBP7.26□□□□□ -1.25
SSBP3-212ENST00000528930 TCRBV5S2A0A599 114 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 SH3PXD2BA1X283 911 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 FARS2O95363 451 aaKnown RBP7.25□□□□□ -1.25
SSBP3-212ENST00000528930 RAB36O95755 333 aa7.25□□□□□ -1.25
SSBP3-212ENST00000528930 SERPINA5P05154 406 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms