RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CDH20Q9HBT6 801 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 VCX3AQ9NNX9 186 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 FAIMQ9NVQ4 179 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 MRPS18AQ9NVS2 196 aaKnown RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 CRNNQ9UBG3 495 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 ASH2LQ9UBL3 628 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 CYB5R1Q9UHQ9 305 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 LRCH1Q9Y2L9 728 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 EXOSC1Q9Y3B2 195 aaKnown RBP6.94□□□□□ -1.3
SSBP3-211ENST00000528787 UGT2A1Q9Y4X1 527 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 COMMD3-BMI1R4GMX3 469 aa6.94□□□□□ -1.3
SSBP3-211ENST00000528787 A0A096LPE4 126 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 A0A1W2PPZ6 126 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 DAPL1A0PJW8 107 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 DLGAP1O14490 977 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 DOK2O60496 412 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 ENTPD6O75354 484 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 MT-ND5P03915 603 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 H2BFMP0C1H6 154 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 SBK2P0C263 348 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 DBTP11182 482 aaKnown RBP6.93□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF12P17014 697 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 GABRB1P18505 474 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 CRYGSP22914 178 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 STOMP27105 288 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 PCSK6P29122 969 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 EPHA2P29317 976 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 PYCR1P32322 319 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 TAS2R43P59537 309 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 GABARAPL2P60520 117 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 TFF3Q07654 80 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 MALLQ13021 153 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 CDK5R2Q13319 367 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 EIF2B1Q14232 305 aaKnown RBP6.93□□□□□ -1.3
SSBP3-211ENST00000528787 DAZAP2Q15038 168 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-211ENST00000528787 TAB1Q15750 504 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 HIKESHIQ53FT3 197 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 PHYHD1Q5SRE7 291 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 C6orf141Q5SZD1 244 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 C6orf52Q5T4I8 152 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 LINC01590Q5TEZ4 76 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 C9orf135Q5VTT2 229 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 ANKRD34AQ69YU3 496 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 DRAM2Q6UX65 266 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 MEX3BQ6ZN04 569 aaKnown RBP6.93□□□□□ -1.3
SSBP3-211ENST00000528787 KRT77Q7Z794 578 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 SKA3Q8IX90 412 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 SLC35F2Q8IXU6 374 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 STX19Q8N4C7 294 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 FTMTQ8N4E7 242 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 SVOPQ8N4V2 548 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF540Q8NDQ6 660 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 CCDC54Q8NEL0 328 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 OR52H1Q8NGJ2 320 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 OR51G2Q8NGK0 314 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 OR52N5Q8NH56 324 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 FBLIM1Q8WUP2 373 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 SNX33Q8WV41 574 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 THRSPQ92748 146 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 NABP1Q96AH0 204 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 ZMYND19Q96E35 227 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-211ENST00000528787 RNFT2Q96EX2 444 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 TMEM80Q96HE8 168 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 CNBD2Q96M20 576 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 TSSK2Q96PF2 358 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 SH3GL3Q99963 347 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 COPS4Q9BT78 406 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 JAM3Q9BX67 310 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 OR2H1Q9GZK4 316 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 RGCCQ9H4X1 137 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 DNAJC27Q9NZQ0 273 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 GDF2Q9UK05 429 aaPredicted RBP6.93□□□□□ -1.3
SSBP3-211ENST00000528787 ERGIC3Q9Y282 383 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 NOP16Q9Y3C1 178 aaKnown RBP6.93□□□□□ -1.3
SSBP3-211ENST00000528787 LRRC42Q9Y546 428 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 PCDHGB5Q9Y5G0 923 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 SLC25A15Q9Y619 301 aa6.93□□□□□ -1.3
SSBP3-211ENST00000528787 UBR5O95071 2799 aaPredicted RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 DOPEY1Q5JWR5 2465 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 MYL12BO14950 172 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 TNFAIP8O95379 198 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 IGLV1-44P01699 117 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 HLA-HP01893 362 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 GYPBP06028 91 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF32P17041 273 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 IGFBP2P18065 325 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 EEF1B2P24534 225 aaKnown RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 SSTR2P30874 369 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 CDAP32320 146 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 LIPAP38571 399 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 RANBP1P43487 201 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 HTR5AP47898 357 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 RIDAP52758 137 aaKnown RBP6.92□□□□□ -1.3
SSBP3-211ENST00000528787 HIST1H3AP68431 136 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ROM1Q03395 351 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF91Q05481 1191 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ETFDHQ16134 617 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 ZMAT1Q5H9K5 638 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 PABPC1L2AQ5JQF8 200 aa6.92□□□□□ -1.3
SSBP3-211ENST00000528787 HIST2H3PS2Q5TEC6 136 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms