RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 THOC3Q96J01 351 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 FER1L6-AS2Q96M78 137 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 MARVELD1Q9BSK0 173 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 OR2B2Q9GZK3 357 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 CENPMQ9NSP4 180 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 FOXJ2Q9P0K8 574 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 OR5V1Q9UGF6 321 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 GTF2A1LQ9UNN4 478 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SLC22A13Q9Y226 551 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 EMC9Q9Y3B6 208 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 CACNG2Q9Y698 323 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SDK2Q58EX2 2172 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 ZNF878C9JN71 531 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 GABARAPH6UMI1 98 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SLC17A2O00624 439 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 EEF1E1O43324 174 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SSX4O60224 188 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 MAS1P04201 325 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 GSTT2BP0CG30 244 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 IGFBP3P17936 291 aaPredicted RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SLC6A1P30531 599 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 CSNK1A1P48729 337 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 TPTEP56180 551 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 B3GALT5-AS1P59052 145 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 GRB2P62993 217 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 GABREP78334 506 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 C19orf57Q0VDD7 668 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 AIMP2Q13155 320 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 TRIP6Q15654 476 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 CSRP2Q16527 193 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 HES3Q5TGS1 186 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 FOXL2NBQ6ZUU3 175 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 TMPRSS12Q86WS5 348 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 ELMOD2Q8IZ81 293 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 BEST3Q8N1M1 668 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 NKAIN3Q8N8D7 197 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 OR14L1PQ8NHC6 308 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SYNPRQ8TBG9 265 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SMIM4Q8WVI0 70 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 YIPF5Q969M3 257 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 RELTQ969Z4 430 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 FAM173AQ9BQD7 235 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 SEC61A2Q9H9S3 476 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 GDF2Q9UK05 429 aaPredicted RBP13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 POLR1DQ9Y2S0 133 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 CACNA1CQ13936 2221 aa13.13□□□□□ -0.31
ECHDC1-220ENST00000528402 TRAV8-7A0A075B6U6 113 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 A0A0J9YW62 118 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 ZNF814B7Z6K7 855 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 CCNKO75909 580 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 APOC1P02654 83 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 ENPP1P22413 925 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 CTSSP25774 331 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 MAGEB1P43366 347 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 CARD18P57730 90 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 OC90Q02509 493 aaPredicted RBP13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 MFGE8Q08431 387 aaPredicted RBP13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 GPR176Q14439 515 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 TAF13Q15543 124 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 RAB11BQ15907 218 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 RSBN1Q5VWQ0 802 aaPredicted RBP13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 B3GNTL1Q67FW5 361 aaPredicted RBP13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 PIP4P1Q86T03 277 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 LINC00346Q8IVM7 164 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 WDFY1Q8IWB7 410 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 OR9K2Q8NGE7 335 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 OR51A4Q8NGJ6 313 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 OR13C3Q8NGS6 347 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 OR6N1Q8NGY5 312 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 OR10AC1Q8NH08 325 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 ADAMTS17Q8TE56 1095 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 ZFP3Q96NJ6 502 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 UTP23Q9BRU9 249 aaKnown RBP13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 MMP28Q9H239 520 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 MOV10Q9HCE1 1003 aaKnown RBP13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 DIABLOQ9NR28 239 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 FAM206AQ9NX38 181 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 LRFN1Q9P244 771 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 B4GALT7Q9UBV7 327 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 RCE1Q9Y256 329 aa13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 MRPS7Q9Y2R9 242 aaKnown RBP13.12□□□□□ -0.31
ECHDC1-220ENST00000528402 LAMA1P25391 3075 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 A0A0B4J203 849 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 A0A1W2PNU3 283 aaPredicted RBP13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 TNFSF15O95150 251 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 HSD11B1P28845 292 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 ZNF84P51523 738 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 RAG2P55895 527 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 ODF4Q2M2E3 257 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 SLC36A2Q495M3 483 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 DCAF10Q5QP82 559 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 DHRS13Q6UX07 377 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 CCDC54Q8NEL0 328 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 FCAMRQ8WWV6 532 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 PTX4Q96A99 478 aa13.11□□□□□ -0.31
ECHDC1-220ENST00000528402 ORAI1Q96D31 301 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms