RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 GABARAPL3Q9BY60 117 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 RACGAP1Q9H0H5 632 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 OR10A4Q9H209 315 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 DCLRE1BQ9H816 532 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 RNPEPL1Q9HAU8 725 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CDH20Q9HBT6 801 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 AMBNQ9NP70 447 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 NGBQ9NPG2 151 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 BRD7Q9NPI1 651 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CENPMQ9NSP4 180 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 FAM118AQ9NWS6 357 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 PLEK2Q9NYT0 353 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CISD1Q9NZ45 108 aaKnown RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CRNNQ9UBG3 495 aaPredicted RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 KCNG2Q9UJ96 466 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 GDF2Q9UK05 429 aaPredicted RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 LAMP3Q9UQV4 416 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 RRP15Q9Y3B9 282 aaKnown RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 GRIP1Q9Y3R0 1128 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 TIMM10BQ9Y5J6 103 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ORC6Q9Y5N6 252 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 GMPPBQ9Y5P6 360 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 FKBP7Q9Y680 259 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 COMMD3-BMI1R4GMX3 469 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 HCFC1P51610 2035 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ADGRG4Q8IZF6 3080 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 HELZ2Q9BYK8 2649 aaKnown RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 IGHV3-64DA0A0J9YX35 117 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 LOC100130705A0A1B0GUX0 176 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 PRR32B1ATL7 298 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 F5H5K5 113 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 H3BSH0 61 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 HS3ST1O14792 307 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 SYNGR3O43761 229 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 AHCYL1O43865 530 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 ENTPD6O75354 484 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 GLCEO94923 617 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 LCKP06239 509 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 GNAO1P09471 354 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 OR4A8P0C604 315 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 NR2C1P13056 603 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF35P13682 527 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 CD53P19397 219 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC2A5P22732 501 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 MPV17P39210 176 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 PEX19P40855 299 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 ALDH3B1P43353 468 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 ENTPD1P49961 510 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 GDI2P50395 445 aaKnown RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC25A1P53007 311 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 RAD23AP54725 363 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 NR1H2P55055 460 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 AQP4P55087 323 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 EFNB1P98172 346 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 IL5RAQ01344 420 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 PLP2Q04941 152 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 AQP6Q13520 282 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 KEAP1Q14145 624 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 HLXQ14774 488 aaPredicted RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 KCNMB1Q16558 191 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 SMN1Q16637 294 aaKnown RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 TBC1D28Q2M2D7 210 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 RSPO1Q2MKA7 263 aaPredicted RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 C6orf52Q5T4I8 152 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 OGFRL1Q5TC84 451 aaPredicted RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 AADACL4Q5VUY2 407 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 LRRN1Q6UXK5 716 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 PLEKHG7Q6ZR37 379 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 RFPL4BQ6ZWI9 263 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 MEPCEQ7L2J0 689 aaKnown RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 SSX6Q7RTT6 188 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 CDH24Q86UP0 819 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 TIGD4Q8IY51 512 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 ENTHD1Q8IYW4 607 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 DEPDC4Q8N2C3 294 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 OR4F15Q8NGB8 312 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 OR51G2Q8NGK0 314 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 OR1J1Q8NGS3 322 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 OR1F12Q8NHA8 337 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 ABHD4Q8TB40 342 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 CNIH3Q8TBE1 160 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 FNDC8Q8TC99 324 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 DNAJC9Q8WXX5 260 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 FBXW5Q969U6 566 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 PPP1R14AQ96A00 147 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 SLAMF6Q96DU3 332 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 PERPQ96FX8 193 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 BOD1Q96IK1 185 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 POM121L2Q96KW2 1035 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 INTS14Q96SY0 518 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 TEAD3Q99594 435 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 CCL19Q99731 98 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 APOL4Q9BPW4 351 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 RHNO1Q9BSD3 238 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 ABHD6Q9BV23 337 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 TPK1Q9H3S4 243 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC24A3Q9HC58 644 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 OBP2BQ9NPH6 170 aa3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 PNRC2Q9NPJ4 139 aaKnown RBP3.97□□□□□ -1.77
CHMP4A-202ENST00000524955 CA10Q9NS85 328 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms