RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SPIN1Q9Y657 262 aaPredicted RBP5.55□□□□□ -1.52
NEDD8-203ENST00000524927 IGHV4OR15-8A0A075B7B6 117 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 IGHV2OR16-5A0A0B4J2B6 119 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 IGHV2-70DA0A0C4DH43 119 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 A0A1B0GVY2 172 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 WASHC1A8K0Z3 465 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 RTCAO00442 366 aaKnown RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 GPR171O14626 319 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 PSMD3O43242 534 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 MRPL33O75394 65 aaKnown RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 TGDSO95455 350 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 IGKV3-15P01624 115 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 H1F0P07305 194 aaKnown RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 CT45A8P0DMV1 189 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 CT45A9P0DMV2 189 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 EEF1B2P24534 225 aaKnown RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 EIF1P41567 113 aaKnown RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 CDKN2BP42772 138 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 SSR2P43308 183 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 EMDP50402 254 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 ACSM1Q08AH1 577 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 MAD2L1BPQ15013 274 aaPredicted RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 PARP6Q2NL67 630 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 PLPPR5Q32ZL2 321 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 CT45A2Q5DJT8 189 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 PPP1R21Q6ZMI0 780 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 ZNF571Q7Z3V5 609 aaPredicted RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 THOC6Q86W42 341 aaKnown RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 CPNE9Q8IYJ1 553 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 ZNF101Q8IZC7 436 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 ZCCHC7Q8N3Z6 543 aaKnown RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 MAPKAPK5-AS1Q8N8E1 139 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 NSMAFQ92636 917 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 EFHD2Q96C19 240 aaPredicted RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 ZNF317Q96PQ6 595 aaPredicted RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 PPA2Q9H2U2 334 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 HIPK2Q9H2X6 1198 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 C10orf88Q9H8K7 445 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 WDR41Q9HAD4 459 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 IARS2Q9NSE4 1012 aaKnown RBP5.54□□□□□ -1.52
NEDD8-203ENST00000524927 ZNF639Q9UID6 485 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 SMAD5-AS1Q9Y6J3 95 aa5.54□□□□□ -1.52
NEDD8-203ENST00000524927 DSPPQ9NZW4 1301 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 ARPC4-TTLL3A0A0A6YYG9 625 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 KIR2DS1A0A191URI9 304 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 A0A1W2PPM1 405 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 A0A1W2PRB8 838 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 PLSCR5A0PG75 271 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 H7C0C1 242 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 KIF2AO00139 706 aaPredicted RBP5.53□□□□□ -1.52
NEDD8-203ENST00000524927 GNAZP19086 355 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 PIK3R1P27986 724 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 GLRXP35754 106 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 ATP5OP48047 213 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 NPY4RP50391 375 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 MMP15P51511 669 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 UBE2NP61088 152 aaKnown RBP5.53□□□□□ -1.52
NEDD8-203ENST00000524927 GNB2P62879 340 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 ZNF763Q0D2J5 394 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 SCARB2Q14108 478 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 EXOSC7Q15024 291 aaKnown RBP5.53□□□□□ -1.52
NEDD8-203ENST00000524927 IZUMO4Q1ZYL8 232 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 TMEM176BQ3YBM2 270 aaPredicted RBP5.53□□□□□ -1.52
NEDD8-203ENST00000524927 TMEM155Q4W5P6 130 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 OR4C11Q6IEV9 310 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 OR52E8Q6IFG1 317 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 C6orf89Q6UWU4 347 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 MARCH3Q86UD3 253 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 COMMD2Q86X83 199 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 CCDC50Q8IVM0 306 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 OR8H3Q8N146 312 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 OTUD6BQ8N6M0 293 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 CD200R1Q8TD46 325 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 ZFP90Q8TF47 636 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 NEURL3Q96EH8 262 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 THOC1Q96FV9 657 aaKnown RBP5.53□□□□□ -1.52
NEDD8-203ENST00000524927 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 MS4A8Q9BY19 250 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 HAUS4Q9H6D7 363 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 NOX3Q9HBY0 568 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 MED17Q9NVC6 651 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 SLC22A14Q9Y267 594 aa5.53□□□□□ -1.52
NEDD8-203ENST00000524927 A0A0U1RQK1 487 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 A0A1W2PPW3 197 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 ANGPTL1O95841 491 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 SKILP12757 684 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 CPMP14384 443 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 AZGP1P25311 298 aaKnown RBP5.52□□□□□ -1.53
NEDD8-203ENST00000524927 THBS3P49746 956 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 XKP51811 444 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 FUT6P51993 359 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 NANOS2P60321 138 aaKnown RBP5.52□□□□□ -1.53
NEDD8-203ENST00000524927 RPS23P62266 143 aaKnown RBP5.52□□□□□ -1.53
NEDD8-203ENST00000524927 GLIPR1L2Q4G1C9 344 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 HSP90AA4PQ58FG1 418 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 PHYHD1Q5SRE7 291 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 LRRC38Q5VT99 294 aa5.52□□□□□ -1.53
NEDD8-203ENST00000524927 CAVIN1Q6NZI2 390 aaKnown RBP5.52□□□□□ -1.53
NEDD8-203ENST00000524927 TRAT1Q6PIZ9 186 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms