RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 OR2G2Q8NGZ5 317 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 LILRB4Q8NHJ6 448 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 MOGAT1Q96PD6 335 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ABHD6Q9BV23 337 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 HINT2Q9BX68 163 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 UBQLN2Q9UHD9 624 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 A0A096LPE4 126 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 LOC100289279A0A1B0GTE1 492 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 TEX51A0A1B0GUA7 166 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 A0A1W2PPZ6 126 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 TRABD2BA6NFA1 517 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 D6RAR5 112 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 LIMS3P0CW19 117 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 LIMS4P0CW20 117 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 LTBRP36941 435 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 SRP9P49458 86 aaKnown RBP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 AKR1D1P51857 326 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 DLX5P56178 289 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 DBPQ10586 325 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 SLC17A1Q14916 467 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZNF141Q15928 474 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 GAB4Q2WGN9 574 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 C3P1Q6ZMU1 363 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 DEFB124Q8NES8 71 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ARL5BQ96KC2 179 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZPBPQ9BS86 351 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 HDGFL3Q9Y3E1 203 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ICE1Q9Y2F5 2266 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 M0QYG6 137 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ITGB2P05107 769 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 EDN3P14138 238 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 FGL1Q08830 312 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ADGRE4PQ86SQ3 457 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR52N5Q8NH56 324 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZBTB8AQ96BR9 441 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 LSM5Q9Y4Y9 91 aaKnown RBP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 CENPVL1A0A0U1RR11 272 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR6C68A6NDL8 312 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 GAAP10253 952 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 FMODQ06828 376 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 RIPPLY1Q0D2K3 151 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 FAPQ12884 760 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 TOMM34Q15785 309 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR4K15Q8NH41 348 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 APH1BQ8WW43 257 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 VWCEQ96DN2 955 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ALKBH3Q96Q83 286 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 FLRT3Q9NZU0 649 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 DUSP13Q9UII6 198 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 ETV7Q9Y603 341 aa11.82□□□□□ -0.52
PCDHGB1-201ENST00000523390 PEX14O75381 377 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 GPANK1O95872 356 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 C1QL3Q5VWW1 255 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 ARSKQ6UWY0 536 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 PGAP1Q75T13 922 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 NKAIN3Q8N8D7 197 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 IER2Q9BTL4 223 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 GPR84Q9NQS5 396 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 FBXO8Q9NRD0 319 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 DTX4Q9Y2E6 619 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 BORCS7-ASMTA0A0B4J1R7 106 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 STMND1H3BQB6 276 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 M0R135 149 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 TSPAN4O14817 238 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZNF254O75437 659 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 TCRBP04435 133 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 CDAP32320 146 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 BDH1Q02338 343 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 PMPCAQ10713 525 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 IKZF1Q13422 519 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR10K2Q6IF99 312 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 LINC00299Q6ZSB3 139 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 SULF2Q8IWU5 870 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 ZNF799Q96GE5 643 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 ENY2Q9NPA8 101 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 LHX9Q9NQ69 397 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 HOXB5P09067 269 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 MVDP53602 400 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 SLC9A3R2Q15599 337 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 PRSS53Q2L4Q9 553 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 WDR74Q6RFH5 385 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 CCDC71LQ8N9Z2 235 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 PSMF1Q92530 271 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 MFRPQ9BY79 579 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 ACACAQ13085 2346 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 TMEM82A0PJX8 343 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 ARPC3O15145 178 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 DHHO43323 396 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 RAC2P15153 192 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 IFITM3Q01628 133 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 STEAP1BQ6NZ63 245 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 GDPD3Q7L5L3 318 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 CMTM1Q8IZ96 169 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 PPP1R35Q8TAP8 253 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 OR2M2Q96R28 347 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 PSD2Q9BQI7 771 aa11.81□□□□□ -0.52
PCDHGB1-201ENST00000523390 PPA2Q9H2U2 334 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms