RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 SMCO1Q147U7 214 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 ZBTB6Q15916 424 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 MRPL23Q16540 153 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 CDKN3Q16667 212 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 GUK1Q16774 197 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 TMEM249Q2WGJ8 235 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 CCNJQ5T5M9 372 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 TMEM225Q6GV28 225 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 OR2A2Q6IF42 318 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 ANKRD26P1Q6NSI1 321 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 CGB2Q6NT52 195 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 APOBEC3HQ6NTF7 200 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 KCNIP4Q6PIL6 250 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 NPSR1Q6W5P4 371 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 IDO2Q6ZQW0 420 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 P4HA3Q7Z4N8 544 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 CBWD2Q8IUF1 395 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 CMTM8Q8IZV2 173 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 ZFP82Q8N141 532 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 PDIK1LQ8N165 341 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 CYP4Z2PQ8N1L4 340 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 CENPSQ8N2Z9 138 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 LINC00612Q8N6U2 182 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 NECAP1Q8NC96 275 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 KLHL30-AS1Q8NEE0 82 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 OR2D3Q8NGH3 330 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 OR2V1Q8NHB1 315 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 RFESDQ8TAC1 157 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 NEK7Q8TDX7 302 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 AGAP11Q8TF27 550 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 GIPC3Q8TF64 312 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 FAM172AQ8WUF8 416 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 SPRYD4Q8WW59 207 aaPredicted RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 DNAJB3Q8WWF6 145 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 ACOT11Q8WXI4 607 aaPredicted RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 SMARCD2Q92925 531 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 ART4Q93070 314 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 MYDGFQ969H8 173 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 DGCR14Q96DF8 476 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 SERPINB11Q96P15 392 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 TEAD3Q99594 435 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 NAPGQ99747 312 aaPredicted RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 KLHDC3Q9BQ90 382 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 SEC22CQ9BRL7 303 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 UTP23Q9BRU9 249 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 NICN1Q9BSH3 213 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 TM2D1Q9BX74 207 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 GSDMCQ9BYG8 508 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 KAT8Q9H7Z6 458 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 SLC7A10Q9NS82 523 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 PIPOXQ9P0Z9 390 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 FBXL3Q9UKT7 428 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 ZNF490Q9ULM2 529 aaPredicted RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 TULP4Q9NRJ4 1543 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 TDRD6O60522 2096 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 ADGRB2O60241 1585 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 CDC42BPGQ6DT37 1551 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 NRCAMQ92823 1304 aa3.42□□□□□ -1.86
CTNNA1-238ENST00000523298 ABCA3Q99758 1704 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 TRPM3Q9HCF6 1732 aaPredicted RBP3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 EIF3AQ14152 1382 aaKnown RBP3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 KIF24Q5T7B8 1368 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 JCADQ9P266 1359 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 PPIAL4EA0A075B759 164 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 LINC00587B1AMM8 73 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 NPIPA7E9PJI5 369 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 RFXANKO14593 260 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 PHOX2AO14813 284 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 SIVA1O15304 175 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 CLOCKO15516 846 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 ZSCAN12O43309 604 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 EFNA2O43921 213 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 ZMPSTE24O75844 475 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 SNAP29O95721 258 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 CRHP06850 196 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 GUSBP08236 651 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 UBCP0CG48 685 aaKnown RBP3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 NPIPA8P0DM63 369 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 PPIAL4FP0DN26 164 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 RNH1P13489 461 aaKnown RBP3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 ME2P23368 584 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 AQP2P41181 271 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 UQCRFS1P47985 274 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 NPBWR2P48146 333 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 CLDN18P56856 261 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 TAS2R60P59551 318 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 CXCL6P80162 114 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 BNIP2Q12982 314 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 EIF4EBP2Q13542 120 aaPredicted RBP3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 EXOSC2Q13868 293 aaKnown RBP3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 SLC10A1Q14973 349 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 TMED2Q15363 201 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 ZNHIT3Q15649 155 aaPredicted RBP3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 SLC1A5Q15758 541 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 Q1RN00 199 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 DCAF4L1Q3SXM0 396 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 TIMM50Q3ZCQ8 353 aa3.41□□□□□ -1.86
CTNNA1-238ENST00000523298 COX19Q49B96 90 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms