RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TRIML2Q8N7C3 387 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 C19orf18Q8NEA5 215 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 HAVCR1Q96D42 359 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 FMO2Q99518 471 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 MRPL13Q9BYD1 178 aaKnown RBP11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 OR2H1Q9GZK4 316 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 SMURF1Q9HCE7 757 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 TAS2R5Q9NYW4 299 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 ERVK-18Q9QC07 812 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 RPUSD1Q9UJJ7 312 aaKnown RBP11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 UGT2A1Q9Y4X1 527 aa11.35□□□□□ -0.59
NKX3-1-202ENST00000523261 A0A0G2JPF8 293 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 HNRNPCL2B2RXH8 293 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 HNRNPCL3B7ZW38 293 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 HNRNPCL1O60812 293 aaKnown RBP11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 MT-ATP6P00846 226 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 HNRNPCL4P0DMR1 293 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 ETFAP13804 333 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 HOXD3P31249 432 aaPredicted RBP11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 CCT5P48643 541 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 SRP9P49458 86 aaKnown RBP11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 SLC35A2P78381 396 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 DCTN2Q13561 401 aaKnown RBP11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 ZNF621Q6ZSS3 439 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 IGFN1Q86VF2 1251 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 COMTD1Q86VU5 262 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 NOXO1Q8NFA2 376 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 WIPF2Q8TF74 440 aaPredicted RBP11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 TMEM19Q96HH6 336 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 RCC1LQ96I51 464 aaKnown RBP11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 CLPTM1LQ96KA5 538 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 PANX1Q96RD7 426 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 SEPHS2Q99611 448 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 CACYBPQ9HB71 228 aaKnown RBP11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 TBCCD1Q9NVR7 557 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 PSMC3IPQ9P2W1 217 aaPredicted RBP11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 TMCC3Q9ULS5 477 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 MAB21L2Q9Y586 359 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 HYDINQ4G0P3 5121 aa11.34□□□□□ -0.59
NKX3-1-202ENST00000523261 MEGF11A6BM72 1044 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 H3BUX3 64 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 RNF13O43567 381 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 ABHD16AO95870 558 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 TUBG1P23258 451 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 S100A3P33764 101 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 SGCAQ16586 387 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 DPY19L1Q2PZI1 675 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 CDONQ4KMG0 1287 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 NKAPLQ5M9Q1 402 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 CEP85LQ5SZL2 805 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 C8orf74Q6P047 294 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 CRIP3Q6Q6R5 217 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 ARL9Q6T311 187 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 METAP1DQ6UB28 335 aaPredicted RBP11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 ALDH16A1Q8IZ83 802 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 OR5AS1Q8N127 324 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 TMEM43Q9BTV4 400 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 MMADHCQ9H3L0 296 aaPredicted RBP11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 TUBG2Q9NRH3 451 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 SERTAD4Q9NUC0 356 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 NKX1-2Q9UD57 310 aaPredicted RBP11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 KPTNQ9Y664 436 aa11.33□□□□□ -0.6
NKX3-1-202ENST00000523261 A0A0B4J2E0 115 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 A0A1B0GVI7 797 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 A0A1B0GX12 115 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 E9PBE3 544 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 NPFFO15130 113 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 OR10H3O60404 316 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 FCN3O75636 299 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 SLC2A10O95528 541 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 KRT75O95678 551 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 PAHP00439 452 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 ECHS1P30084 290 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 DSTNP60981 165 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 HOXA4Q00056 320 aaPredicted RBP11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 GUCY1A3Q02108 690 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 LY6EQ16553 131 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 FAM27BQ5VT28 67 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 NUDCD3Q8IVD9 361 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 OR13G1Q8NGZ3 307 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 STARD10Q9Y365 291 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 CSMD3Q7Z407 3707 aa11.32□□□□□ -0.6
NKX3-1-202ENST00000523261 IGKV1D-43A0A0B4J1Z2 117 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 A0A1W2PRD5 423 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 A0A1W2PRF3 423 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 A0A1W2PRM7 423 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 CENPBD1B2RD01 187 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 F5H5P2 479 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 MLNRO43193 412 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 DUS4LO95620 317 aaKnown RBP11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 EEF1B2P24534 225 aaKnown RBP11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 SAA4P35542 130 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 BTN2A1Q7KYR7 527 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 ZNF572Q7Z3I7 529 aaPredicted RBP11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 OR8G5Q8NG78 346 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 PTP4A1Q93096 173 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 NMD3Q96D46 503 aaKnown RBP11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
NKX3-1-202ENST00000523261 SELENONQ9NZV5 590 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms