RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ZNF385BQ569K4 471 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 SHEQ5VZ18 495 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 LAX1Q8IWV1 398 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 PRSS35Q8N3Z0 413 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 PAQR8Q8TEZ7 354 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 OPALINQ96PE5 141 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 TXNIPQ9H3M7 391 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 APC2O95996 2303 aa14.8□□□□□ -0.04
PCDHA3-201ENST00000522353 HOXC4P09017 264 aaPredicted RBP14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 SRMP19623 302 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 NXPH1P58417 271 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 NKX6-1P78426 367 aaPredicted RBP14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 SORDQ00796 357 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF674Q2M3X9 581 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 SYT6Q5T7P8 510 aaPredicted RBP14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 SLAMF9Q96A28 289 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 LOC107986453A0A1B0GWG9 222 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 CISD3P0C7P0 127 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 CHRNB1P11230 501 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 SHBQ15464 509 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 LAMA4Q16363 1823 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 OR5M11Q96RB7 305 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 PKMYT1Q99640 499 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 GPR173Q9NS66 373 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 IGHV1OR21-1A0A087WYE8 117 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 A0A096LPE4 126 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 A0A1W2PPZ6 126 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 SUB1P53999 127 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 OR10J5Q8NHC4 309 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 TCEAL2Q9H3H9 227 aaPredicted RBP14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 ACER3Q9NUN7 267 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 CTSFQ9UBX1 484 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 DHHO43323 396 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 ARRB2P32121 409 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 PMPCAQ10713 525 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 PLA2G7Q13093 441 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 HNF4GQ14541 408 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF766Q5HY98 468 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 STEAP1BQ6NZ63 245 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF321PQ8N8H1 164 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 NANPQ8TBE9 248 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 ATF6BQ99941 703 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 FAM96BQ9Y3D0 163 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 GLRA1P23415 457 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 C11orf91Q3C1V1 193 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 TFAP2EQ6VUC0 442 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 NRARPQ7Z6K4 114 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 DEFB108BQ8NET1 73 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 OR51F2Q8NH61 342 aa14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 RIMS4Q9H426 269 aaPredicted RBP14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 METTL17Q9H7H0 456 aaPredicted RBP14.79□□□□□ -0.04
PCDHA3-201ENST00000522353 SPI1P17947 270 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 PIGAP37287 484 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 GNB2P62879 340 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 LAIR1Q6GTX8 287 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 OR2L13Q8N349 312 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 OR2A14Q96R47 310 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 S1PR5Q9H228 398 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 TAS2R16Q9NYV7 291 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 A3GALT2U3KPV4 340 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 TNFSF11O14788 317 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 PHF1O43189 567 aaPredicted RBP14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 SNAPINO95295 136 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 SOD1P00441 154 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 ADH4P08319 380 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 DIO1P49895 249 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 RAC1P63000 192 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF468Q5VIY5 522 aaPredicted RBP14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 KIAA1456Q9P272 454 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 OR2A25A4D2G3 310 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 ANKUB1A6NFN9 424 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 HSBP1L1C9JCN9 74 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 GMDSO60547 372 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 OGFOD3Q6PK18 319 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 DPPA2Q7Z7J5 298 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 GABRG3Q99928 467 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 CNTNAP3Q9BZ76 1288 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 PPIL1Q9Y3C6 166 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 TMEM129A0AVI4 362 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 HSPB2A8KAH6 182 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 HIST1H1CP16403 213 aaKnown RBP14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 HSPB2Q16082 182 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 USP51Q70EK9 711 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 LGI3Q8N145 548 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 OR51E1Q8TCB6 317 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 HAS2Q92819 552 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 FAM212BQ9NTI7 297 aaPredicted RBP14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 SERGEFQ9UGK8 458 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 SLCO1B1Q9Y6L6 691 aa14.78□□□□□ -0.04
PCDHA3-201ENST00000522353 PRSS37A4D1T9 235 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 ATP1B1P05026 303 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 PIPP12273 146 aaPredicted RBP14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 SCGB2A2Q13296 93 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 GPBAR1Q8TDU6 330 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 CNRIP1Q96F85 164 aaPredicted RBP14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 UGT2A1Q9Y4X1 527 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 LGALS8O00214 317 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 HS3ST1O14792 307 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 HBE1P02100 147 aa14.77□□□□□ -0.04
PCDHA3-201ENST00000522353 PPP3CBP16298 524 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms