RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 EPXP11678 715 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 RAD52P43351 418 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 MSMO1Q15800 293 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 FAM122BQ7Z309 247 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 GABRG1Q8N1C3 465 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 OR2L13Q8N349 312 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 SLC25A43Q8WUT9 341 aaPredicted RBP12.58□□□□□ -0.4
SYNPO-205ENST00000522122 FRZBQ92765 325 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 PIGTQ969N2 578 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 CMTM3Q96MX0 182 aa12.58□□□□□ -0.4
SYNPO-205ENST00000522122 TXNL1O43396 289 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 TMEM127O75204 238 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 OR1D5P58170 312 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 GRB2P62993 217 aaKnown RBP12.57□□□□□ -0.4
SYNPO-205ENST00000522122 SRPXP78539 464 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 SLC25A35Q3KQZ1 300 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 HAS2Q92819 552 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 LAT2Q9GZY6 243 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 FLVCR2Q9UPI3 526 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 PPP2CBP62714 309 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 PPP2CAP67775 309 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 CLLU1Q5K131 121 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 STAC2Q6ZMT1 411 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 MORN4Q8NDC4 146 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 FAM213BQ8TBF2 198 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF416Q9BWM5 594 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 PRDM7Q9NQW5 492 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 PUS1Q9Y606 427 aaKnown RBP eCLIP12.57□□□□□ -0.4
SYNPO-205ENST00000522122 KNTC1P50748 2209 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 IGHV3-20A0A0C4DH32 117 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 TMEM235A6NFC5 223 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 EGR3Q06889 387 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 IKZF1Q13422 519 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 AGBL4Q5VU57 503 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 OR4D11Q8NGI4 311 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 SEMA4CQ9C0C4 833 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
SYNPO-205ENST00000522122 MMP17Q9ULZ9 603 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
SYNPO-205ENST00000522122 PLA2G10O15496 165 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 GCM2O75603 506 aaPredicted RBP12.57□□□□□ -0.4
SYNPO-205ENST00000522122 ECI1P42126 302 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 ARG2P78540 354 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 HSF1Q00613 529 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 HMGN3Q15651 99 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 SMIM4Q8WVI0 70 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 GCDHQ92947 438 aaPredicted RBP12.57□□□□□ -0.4
SYNPO-205ENST00000522122 MAP6Q96JE9 813 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 MRGPRX3Q96LB0 322 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 PIGMQ9H3S5 423 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 BANF2Q9H503 90 aa12.57□□□□□ -0.4
SYNPO-205ENST00000522122 MSL3P1P0C860 447 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 MVDP53602 400 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 NKAIN1Q4KMZ8 207 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF770Q6IQ21 691 aaPredicted RBP12.56□□□□□ -0.4
SYNPO-205ENST00000522122 OGFOD3Q6PK18 319 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 KIRREL2Q6UWL6 708 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 NLRC3Q7RTR2 1065 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
SYNPO-205ENST00000522122 RNF170Q96K19 258 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 MRPS18AQ9NVS2 196 aaKnown RBP12.56□□□□□ -0.4
SYNPO-205ENST00000522122 A0A1W2PPV4 95 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 METAP1P53582 386 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 UBE2KP61086 200 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 RPP30P78346 268 aaKnown RBP12.56□□□□□ -0.4
SYNPO-205ENST00000522122 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 STK11Q15831 433 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 SOHLH1Q5JUK2 328 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 FAAP20Q6NZ36 180 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 FAM71CQ8NEG0 241 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 OCSTAMPQ9BR26 566 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 OR2F2O95006 317 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 EN2P19622 333 aaPredicted RBP12.56□□□□□ -0.4
SYNPO-205ENST00000522122 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 OR2F1Q13607 317 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 PRTGQ2VWP7 1150 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 KIAA0907Q7Z7F0 614 aaPredicted RBP12.56□□□□□ -0.4
SYNPO-205ENST00000522122 NAXDQ8IW45 347 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 PLPP5Q8NEB5 264 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 SDSLQ96GA7 329 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 PIGQQ9BRB3 760 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 CHST11Q9NPF2 352 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 PISDQ9UG56 409 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 SLC17A4Q9Y2C5 497 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 TIMM8BQ9Y5J9 83 aaPredicted RBP12.56□□□□□ -0.4
SYNPO-205ENST00000522122 TRIP12Q14669 1992 aaPredicted RBP12.56□□□□□ -0.4
SYNPO-205ENST00000522122 HSPB2A8KAH6 182 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 CEBPZOSA8MTT3 80 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 SNRPGP15A8MWD9 76 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 HSPB2Q16082 182 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 C2orf76Q3KRA6 126 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 DOK3Q7L591 496 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 WDSUB1Q8N9V3 476 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 HSD17B11Q8NBQ5 300 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 OR8D4Q8NGM9 314 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 DERL3Q96Q80 235 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 AUNIPQ9H7T9 357 aa12.56□□□□□ -0.4
SYNPO-205ENST00000522122 MEIKINA0A087WXM9 373 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 PLRG1O43660 514 aaKnown RBP12.55□□□□□ -0.4
SYNPO-205ENST00000522122 ABHD16AO95870 558 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms