RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PCGF3Q3KNV8 242 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 SLC18B1Q6NT16 456 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 GABARAPL3Q9BY60 117 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 MS4A5Q9H3V2 200 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 CACNA1DQ01668 2161 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 LOC100509620A0A075B734 347 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 RIIAD1A6NNX1 92 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 SURF4O15260 269 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 SGCEO43556 437 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 IGFBP1P08833 259 aaPredicted RBP8.14□□□□□ -1.11
CLK4-209ENST00000521621 NOS3P29474 1203 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 PIGFQ07326 219 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 OR52E2Q8NGJ4 325 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 OR1F12Q8NHA8 337 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 MARS2Q96GW9 593 aaKnown RBP8.14□□□□□ -1.11
CLK4-209ENST00000521621 C1orf159Q96HA4 380 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 CACNG6Q9BXT2 260 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 PRRG3Q9BZD7 231 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 RAB1BQ9H0U4 201 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 PAPOLBQ9NRJ5 636 aaKnown RBP8.14□□□□□ -1.11
CLK4-209ENST00000521621 LHFPL6Q9Y693 200 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 CRYBG3Q68DQ2 2970 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 DCHS2Q6V1P9 2916 aa8.14□□□□□ -1.11
CLK4-209ENST00000521621 TFP02787 698 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 ERCC1P07992 297 aaPredicted RBP8.13□□□□□ -1.11
CLK4-209ENST00000521621 CD55P08174 381 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 CD99P14209 185 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 KITLGP21583 273 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 ATP5J2P56134 94 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 FOXD4Q12950 439 aaPredicted RBP8.13□□□□□ -1.11
CLK4-209ENST00000521621 NPRL3Q12980 569 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 TMED1Q13445 227 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 ELFN2Q5R3F8 820 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 LINC01590Q5TEZ4 76 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 BIVMQ86UB2 503 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 LRRC18Q8N456 261 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 OR4K13Q8NH42 304 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 PNRC2Q9NPJ4 139 aaKnown RBP8.13□□□□□ -1.11
CLK4-209ENST00000521621 A0A096LNT2 108 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 G3V2T6 193 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 H3BNX3 289 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 H7C1C5 153 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 DCTN6O00399 190 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 E2F6O75461 281 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 GLCEO94923 617 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 SPI1P17947 270 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 SLC2A5P22732 501 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 WNT5AP41221 380 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 DAPP51397 102 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 NUDT6P53370 316 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 CRISP1P54107 249 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 LCN6P62502 163 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 PPP2R2BQ00005 443 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 GGTLC2Q14390 218 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 SLX4IPQ5VYV7 408 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 RGS7BPQ6MZT1 257 aaPredicted RBP8.13□□□□□ -1.11
CLK4-209ENST00000521621 UGT2A3Q6UWM9 527 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 ZDHHC13Q8IUH4 622 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 ZNF454Q8N9F8 522 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 MS4A3Q96HJ5 214 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 C4orf45Q96LM5 186 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 C1QTNF5Q9BXJ0 243 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 TOR3AQ9H497 397 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 C8orf4Q9NR00 106 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 MRPL22Q9NWU5 206 aaKnown RBP8.13□□□□□ -1.11
CLK4-209ENST00000521621 U3KQV3 271 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 OTOGQ6ZRI0 2925 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 DSCAMO60469 2012 aa8.13□□□□□ -1.11
CLK4-209ENST00000521621 ZAR1LA6NP61 321 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 TIPRLO75663 272 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 PAICSP22234 425 aaKnown RBP8.12□□□□□ -1.11
CLK4-209ENST00000521621 LOXL1Q08397 574 aaPredicted RBP8.12□□□□□ -1.11
CLK4-209ENST00000521621 SLC25A30Q5SVS4 291 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 C12orf73Q69YU5 71 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 FBXW12Q6X9E4 464 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 KRT74Q7RTS7 529 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 EGFL6Q8IUX8 553 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 PAQR4Q8N4S7 273 aaPredicted RBP8.12□□□□□ -1.11
CLK4-209ENST00000521621 SYNPRQ8TBG9 265 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 C18orf12Q96KH6 178 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 MNTQ99583 582 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 MRPL37Q9BZE1 423 aaKnown RBP8.12□□□□□ -1.11
CLK4-209ENST00000521621 RPRD1BQ9NQG5 326 aaKnown RBP8.12□□□□□ -1.11
CLK4-209ENST00000521621 DOK2O60496 412 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 FSTL3O95633 263 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 CPT2P23786 658 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 APEX1P27695 318 aaKnown RBP8.12□□□□□ -1.11
CLK4-209ENST00000521621 ENTPD1P49961 510 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 SELENOVP59797 346 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 ZNF718Q3SXZ3 478 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 ZMAT1Q5H9K5 638 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 ALKBH2Q6NS38 261 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 ZNF774Q6NX45 483 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 SHFQ7M4L6 423 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 SDR9C7Q8NEX9 313 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 RBM4BQ9BQ04 359 aaKnown RBP8.12□□□□□ -1.11
CLK4-209ENST00000521621 OPA3Q9H6K4 179 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 SP140LQ9H930 580 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 HAO2Q9NYQ3 351 aa8.12□□□□□ -1.11
CLK4-209ENST00000521621 ACOD1A6NK06 481 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms