RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 C1orf21Q9H246 121 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SLC38A1Q9H2H9 487 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SLA2Q9H6Q3 261 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CACYBPQ9HB71 228 aaKnown RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 DEPPQ9NTK1 212 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CMTM6Q9NX76 183 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 TAS2R1Q9NYW7 299 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 NPAP1Q9NZP6 1156 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 KLRF1Q9NZS2 232 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 TMEM181Q9P2C4 612 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 P2RX2Q9UBL9 471 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CACNG5Q9UF02 275 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 PRDM4Q9UKN5 801 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 BOKQ9UMX3 212 aaPredicted RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 ANGPT4Q9Y264 503 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 EXOGQ9Y2C4 368 aaKnown RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 MRPS18CQ9Y3D5 142 aaKnown RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 L3MBTL1Q9Y468 752 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 URB1O60287 2271 aaKnown RBP2.76□□□□□ -1.97
VPS13B-209ENST00000521559 CACNA1AO00555 2505 aa2.76□□□□□ -1.97
VPS13B-209ENST00000521559 SPTBN2O15020 2390 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 USP34Q70CQ2 3546 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 DSPPQ9NZW4 1301 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 AHCTF1Q8WYP5 2266 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 IGHV4-4A0A075B6R2 117 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 A0A087WW49 117 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 A0A087WZY1 265 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 IGHV4-61A0A0C4DH41 118 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 PRORSD1PA6NEY8 169 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ANKUB1A6NFN9 424 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 NPIPA5E9PKD4 350 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 NME4O00746 187 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 GYG2O15488 501 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF264O43296 627 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SPRY1O43609 319 aaPredicted RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SCO2O43819 266 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 EIF4E2O60573 245 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 GCM2O75603 506 aaPredicted RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SERPINB7O75635 380 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 TRMUO75648 421 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 CBR3O75828 277 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 TRAPPC6AO75865 159 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SORBS2O94875 1100 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 MFN2O95140 757 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ANGPTL1O95841 491 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 CSTAP01040 98 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 IFNA14P01570 189 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 IGHV4-59P01825 116 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 HPNP05981 417 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 LINGO3P0C6S8 592 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 OR2T7P0C7T2 308 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 PABPC4LP0CB38 370 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 HSD17B1P14061 328 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 RPS4Y1P22090 263 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 EEF1B2P24534 225 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 HTR1EP28566 365 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SRD5A2P31213 254 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 KDELR2P33947 212 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SLC6A8P48029 635 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 GSK3BP49841 420 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 GABPB1Q06547 395 aaPredicted RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SLC10A1Q14973 349 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 CD226Q15762 336 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 GLYR1Q49A26 553 aaPredicted RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 DNAL1Q4LDG9 190 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 LIN52Q52LA3 116 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF311Q5JNZ3 666 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 PDZK1Q5T2W1 519 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 OR5M10Q6IEU7 315 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 DHRS4L2Q6PKH6 230 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 RBPMS2Q6ZRY4 209 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 EIF3MQ7L2H7 374 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 HMGN2P46Q86SG4 172 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 GALNT10Q86SR1 603 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 IFNEQ86WN2 208 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 VRK2Q86Y07 508 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 PLCZ1Q86YW0 608 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SIAH3Q8IW03 269 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 MICU2Q8IYU8 434 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF843Q8N446 348 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 TMEM251Q8N6I4 163 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF614Q8N883 585 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 GATSQ8NAP1 163 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 FAM71CQ8NEG0 241 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 Q8NFD4 153 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 OR4K17Q8NGC6 315 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 OR1J4Q8NGS1 313 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 OR52P1PQ8NH57 321 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 OR5W2Q8NH69 310 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 OR2T6Q8NHC8 308 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 FGFBP3Q8TAT2 258 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ZFAND2BQ8WV99 257 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SLC35B4Q969S0 331 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 SNRNP40Q96DI7 357 aaKnown RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ARSGQ96EG1 525 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF597Q96LX8 424 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 JSRP1Q96MG2 331 aaPredicted RBP2.75□□□□□ -1.97
VPS13B-209ENST00000521559 TAAR6Q96RI8 345 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF607Q96SK3 696 aa2.75□□□□□ -1.97
VPS13B-209ENST00000521559 KCTD14Q9BQ13 255 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms