RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 LSM2Q9Y333 95 aaKnown RBP7.86□□□□□ -1.15
CSMD1-208ENST00000520561 LHFPL6Q9Y693 200 aa7.86□□□□□ -1.15
CSMD1-208ENST00000520561 USP24Q9UPU5 2620 aa7.86□□□□□ -1.15
CSMD1-208ENST00000520561 SHANK1Q9Y566 2161 aa7.86□□□□□ -1.15
CSMD1-208ENST00000520561 GTF3C1Q12789 2109 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 A0A096LPE4 126 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 A0A1B0GUH1 482 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 A0A1W2PPZ6 126 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 PSMD9O00233 223 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 SGCEO43556 437 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 DOK2O60496 412 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 ZNF254O75437 659 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 SULT1C4O75897 302 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 LYZL6O75951 148 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 INMTO95050 263 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 UBL3O95164 117 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 H2BFMP0C1H6 154 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 IL32P24001 234 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 HSD11B1P28845 292 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 TTKP33981 857 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 CD79BP40259 229 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 ALDH3B2P48448 385 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 GBX2P52951 348 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 FOXG1P55316 489 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 GRB2P62993 217 aaKnown RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 BDH1Q02338 343 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 ROM1Q03395 351 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 MLLT11Q13015 90 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 P2RY6Q15077 328 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 RAB35Q15286 201 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 TBRG1Q3YBR2 411 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 SYT6Q5T7P8 510 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 OR7E24Q6IFN5 339 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 TMEM53Q6P2H8 277 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 DEGS2Q6QHC5 323 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 LRRN1Q6UXK5 716 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 CFAP77Q6ZQR2 320 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 NCCRP1Q6ZVX7 275 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 SPATC1Q76KD6 591 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 VASH1Q7L8A9 365 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 KCTD20Q7Z5Y7 419 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 LUZP2Q86TE4 346 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 CXorf67Q86X51 503 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 KLBQ86Z14 1044 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 CCDC36Q8IYA8 594 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 ZNF679Q8IYX0 411 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 GABRG1Q8N1C3 465 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 C17orf78Q8N4C9 275 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 ZNF610Q8N9Z0 462 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 ST7LQ8TDW4 575 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 RNF133Q8WVZ7 376 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 GATAD2BQ8WXI9 593 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 UFD1Q92890 307 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 FBXO17Q96EF6 278 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 COG8Q96MW5 612 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 AMELYQ99218 206 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 MGLLQ99685 303 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 HDHD2Q9H0R4 259 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 RNF121Q9H920 327 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 ISYNA1Q9NPH2 558 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 ACOXLQ9NUZ1 547 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 PLEK2Q9NYT0 353 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 COQ3Q9NZJ6 369 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 MRM2Q9UI43 246 aaKnown RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 TIMM10BQ9Y5J6 103 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 PIEZO2Q9H5I5 2752 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 CFAP47Q6ZTR5 3102 aa7.85□□□□□ -1.15
CSMD1-208ENST00000520561 PHF3Q92576 2039 aaKnown RBP7.85□□□□□ -1.15
CSMD1-208ENST00000520561 PRR32B1ATL7 298 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 B8ZZF3 427 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 RER1O15258 196 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 NOL3O60936 208 aaKnown RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 RPP14O95059 124 aaKnown RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ABHD16AO95870 558 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 WNT11O96014 354 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 CD79AP11912 226 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ZNF32P17041 273 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 GNLYP22749 145 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ARR3P36575 388 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 OPRL1P41146 370 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 HTR5AP47898 357 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 GP2P55259 537 aaKnown RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 OR12D2P58182 307 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ACSM1Q08AH1 577 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 RAB39AQ14964 217 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 TSTQ16762 297 aaKnown RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ZNF829Q3KNS6 432 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 SLC25A35Q3KQZ1 300 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 HIKESHIQ53FT3 197 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ARMCX4Q5H9R4 360 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ELFN2Q5R3F8 820 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 SFRP5Q5T4F7 317 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ZNF684Q5T5D7 378 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 RHOUQ7L0Q8 258 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 BHLHA15Q7RTS1 189 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 FJX1Q86VR8 437 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 SKA3Q8IX90 412 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ZNF433Q8N7K0 673 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms