RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SLC2A14Q8TDB8 520 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 TPD52L3Q96J77 140 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 PKNOX2Q96KN3 472 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 ATP5SQ99766 215 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 RNF5Q99942 180 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 CENPKQ9BS16 269 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 ILKAPQ9H0C8 392 aaPredicted RBP1.82□□□□□ -2.12
SKP1-207ENST00000520417 CWH43Q9H720 699 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 PISDQ9UG56 409 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 TRMT112Q9UI30 125 aaKnown RBP1.82□□□□□ -2.12
SKP1-207ENST00000520417 TMED5Q9Y3A6 229 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 S4R3C0 116 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 NID2Q14112 1375 aa1.82□□□□□ -2.12
SKP1-207ENST00000520417 GLYATL1P3A0A0U1RQE8 302 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 HEATR9A2RTY3 570 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 SMCO3A2RU48 225 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 FAM47DPA6NHR8 397 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 RAB29O14966 203 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 LSM1O15116 133 aaKnown RBP1.81□□□□□ -2.12
SKP1-207ENST00000520417 WBP4O75554 376 aaKnown RBP1.81□□□□□ -2.12
SKP1-207ENST00000520417 UQCRFS1P1P0C7P4 283 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 ZNF250P15622 560 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 F2RP25116 425 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 SLC11A1P49279 550 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 ACLYP53396 1101 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 ADARB1P78563 741 aaKnown RBP1.81□□□□□ -2.12
SKP1-207ENST00000520417 RGNQ15493 299 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 DNAJC24Q6P3W2 148 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 LRRC52Q8N7C0 313 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 OR56B2PQ8NGI1 322 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 ABHD3Q8WU67 409 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 KIFAP3Q92845 792 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 OR5B12Q96R08 314 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 SLC29A1Q99808 456 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 FGF20Q9NP95 211 aaPredicted RBP1.81□□□□□ -2.12
SKP1-207ENST00000520417 PSG8Q9UQ74 426 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 CSDC2Q9Y534 153 aaKnown RBP1.81□□□□□ -2.12
SKP1-207ENST00000520417 WDR62O43379 1518 aa1.81□□□□□ -2.12
SKP1-207ENST00000520417 SPECC1L-ADORA2AF8WAN1 911 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 CLPXO76031 633 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 UBTFL6P0CB48 400 aaPredicted RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 CCNB1P14635 433 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 EIF2S2P20042 333 aaKnown RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 RAB3BP20337 219 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 WARSP23381 471 aaKnown RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 FOXN2P32314 431 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 CEACAM3P40198 252 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 NSG1P42857 185 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 TNNT2P45379 298 aaPredicted RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 TMED10P49755 219 aaKnown RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 LOXL1Q08397 574 aaPredicted RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 SRSF5Q13243 272 aaKnown RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 IGFBP7Q16270 282 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 SNRNP35Q16560 246 aaKnown RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 SMUG1Q53HV7 270 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 PPM1LQ5SGD2 360 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 SPECC1LQ69YQ0 1117 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 SLC8B1Q6J4K2 584 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 PRMT9Q6P2P2 845 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 DUX4L9Q6RFH8 374 aaPredicted RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 ARL9Q6T311 187 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 PLET1Q6UQ28 207 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 CALHM1Q8IU99 346 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 GATSQ8NAP1 163 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 NTAN1Q96AB6 310 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 PLIN2Q99541 437 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 TIMM29Q9BSF4 260 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 ZNF717Q9BY31 904 aaPredicted RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 SYNDIG1Q9H7V2 258 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 UXTQ9UBK9 157 aaPredicted RBP1.8□□□□□ -2.12
SKP1-207ENST00000520417 ZNF391Q9UJN7 358 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 ST3GAL6Q9Y274 331 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 IKBKGQ9Y6K9 419 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 USP47Q96K76 1375 aa1.8□□□□□ -2.12
SKP1-207ENST00000520417 MRPS12O15235 138 aaKnown RBP1.79□□□□□ -2.12
SKP1-207ENST00000520417 RNF13O43567 381 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 RDH16O75452 317 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 OR2J3O76001 311 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 SERPINA5P05154 406 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 ACSM4P0C7M7 580 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 OR5H8P0DN80 308 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 ZNF43P17038 809 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 RRM2P31350 389 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 TGFBR1P36897 503 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 AQP2P41181 271 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 NAA10P41227 235 aaPredicted RBP1.79□□□□□ -2.12
SKP1-207ENST00000520417 CSNK1EP49674 416 aaKnown RBP1.79□□□□□ -2.12
SKP1-207ENST00000520417 ZNF138P52744 262 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 VSX2P58304 361 aaPredicted RBP1.79□□□□□ -2.12
SKP1-207ENST00000520417 SLC25A11Q02978 314 aaKnown RBP1.79□□□□□ -2.12
SKP1-207ENST00000520417 MXD1Q05195 221 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 METTL21CQ5VZV1 264 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 CEMP1Q6PRD7 247 aaPredicted RBP1.79□□□□□ -2.12
SKP1-207ENST00000520417 SASS6Q6UVJ0 657 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 CDR2LQ86X02 465 aaPredicted RBP1.79□□□□□ -2.12
SKP1-207ENST00000520417 MIR7-3HGQ8N6C7 128 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 OR10J6PQ8NGY7 276 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 COQ8AQ8NI60 647 aa1.79□□□□□ -2.12
SKP1-207ENST00000520417 RTN4IP1Q8WWV3 396 aaPredicted RBP1.79□□□□□ -2.12
SKP1-207ENST00000520417 MICU1Q9BPX6 476 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms