RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 HMGN2P46Q86SG4 172 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 NR2C2APQ86WQ0 139 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 GRAMD2AQ8IUY3 354 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 MSRB3Q8IXL7 192 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 PEX5LQ8IYB4 626 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 GPR119Q8TDV5 335 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 ARSGQ96EG1 525 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 ST6GAL2Q96JF0 529 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 RNF145Q96MT1 663 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF317Q96PQ6 595 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 KLHDC3Q9BQ90 382 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 ABHD6Q9BV23 337 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 THUMPD3Q9BV44 507 aaKnown RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 UCK2Q9BZX2 261 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 SLC38A1Q9H2H9 487 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 CACYBPQ9HB71 228 aaKnown RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 A4GALTQ9NPC4 353 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 SLC25A37Q9NYZ2 338 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 LEF1Q9UJU2 399 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-208ENST00000520228 SLC35A3Q9Y2D2 325 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 L3MBTL1Q9Y468 752 aa6.01□□□□□ -1.45
SDCBP-208ENST00000520228 ELOVL7A1L3X0 281 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 FAM172BPA6NC97 362 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 NKX2-6A6NCS4 301 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 SLC22A20A6NK97 555 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 CLDN24A6NM45 220 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 GJE1A6NN92 205 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 C5orf58C9J3I9 102 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 PRR23D1E9PI22 279 aaPredicted RBP6□□□□□ -1.45
SDCBP-208ENST00000520228 DYNC1I1O14576 645 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 BCAS1O75363 584 aaPredicted RBP6□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF432O94892 652 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 RCBTB2O95199 551 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 TGM6O95932 706 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 BCHEP06276 602 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 PRR23D2P0DMB1 279 aaPredicted RBP6□□□□□ -1.45
SDCBP-208ENST00000520228 COX6B1P14854 86 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 PGCP20142 388 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 CBLP22681 906 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 OPRM1P35372 400 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 SUCLG1P53597 346 aaKnown RBP6□□□□□ -1.45
SDCBP-208ENST00000520228 CRISP3P54108 245 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 CLDN15P56746 228 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 FOXF1Q12946 379 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 MAPK11Q15759 364 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 TOMM34Q15785 309 aaPredicted RBP6□□□□□ -1.45
SDCBP-208ENST00000520228 SGCBQ16585 318 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 SLC25A35Q3KQZ1 300 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 DLEU7Q6UYE1 221 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 P4HA3Q7Z4N8 544 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 OR8H2Q8N162 312 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 FAM71CQ8NEG0 241 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 ATP6V1C2Q8NEY4 427 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 OR2AJ1Q8NGZ0 328 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 OR52P1PQ8NH57 321 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 MOSPD2Q8NHP6 518 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 TMEM234Q8WY98 164 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 MAL2Q969L2 176 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 ZFP3Q96NJ6 502 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 PINK1Q9BXM7 581 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 TMEM185BQ9H7F4 350 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 EXOSC3Q9NQT5 275 aaKnown RBP6□□□□□ -1.45
SDCBP-208ENST00000520228 SAR1AQ9NR31 198 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 VAPAQ9P0L0 249 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 CLCF1Q9UBD9 225 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF629Q9UEG4 869 aaPredicted RBP6□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF175Q9Y473 711 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 GMEB1Q9Y692 573 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 DOPEY2Q9Y3R5 2298 aa6□□□□□ -1.45
SDCBP-208ENST00000520228 LOC100653049A0A140TA62 436 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 C19orf84I3L1E1 186 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 XRCC3O43542 346 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 EFNA2O43921 213 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 LMX1BO60663 402 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 KRT34O76011 436 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 SYNGR4O95473 234 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 UQCRBP14927 111 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 GPX2P18283 190 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 RPS4Y1P22090 263 aaKnown RBP5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ELK4P28324 431 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 GABRA5P31644 462 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 SFTPDP35247 375 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 SLC6A8P48029 635 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 IDH2P48735 452 aaKnown RBP5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ZNF136P52737 540 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 DVL1P1P54792 670 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-208ENST00000520228 CARD18P57730 90 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 CDK6Q00534 326 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 MERTKQ12866 999 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 CYLC2Q14093 348 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-208ENST00000520228 PON3Q15166 354 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 MAPRE2Q15555 327 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 ZSWIM7Q19AV6 140 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 TMEM176BQ3YBM2 270 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-208ENST00000520228 LIN52Q52LA3 116 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 SLC25A53Q5H9E4 307 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 PRAMEF8Q5VWM4 474 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 PRAMEF7Q5VXH5 474 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 HBMQ6B0K9 141 aa5.99□□□□□ -1.45
SDCBP-208ENST00000520228 OR2A2Q6IF42 318 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms