RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 CPSF4LA6NMK7 179 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 VWC2LB2RUY7 222 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 M0R3G1 203 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 BGLAPP02818 100 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 OR4A8P0C604 315 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 CALCRP30988 508 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 RBM34P42696 430 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 OMPP47874 163 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 PPOXP50336 477 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.681e-6■■■■□ 22.6
TRAPPC9-206ENST00000519482 TBCEQ15813 527 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 ADIPOQQ15848 244 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 SMN1Q16637 294 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 KLHL22Q53GT1 634 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 SLC27A4Q6P1M0 643 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 LINC00299Q6ZSB3 139 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 SLC46A3Q7Z3Q1 461 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 C20orf196Q8IYI0 205 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 TEX47Q8TBZ9 253 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 RNF217Q8TC41 542 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 SORCS2Q96PQ0 1159 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 KCNK17Q96T54 332 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 VRK1Q99986 396 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 PIMREGQ9BSJ6 248 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 ASPNQ9BXN1 380 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 PLK3Q9H4B4 646 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 B3GAT2Q9NPZ5 323 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 MRPS18AQ9NVS2 196 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 MRPL39Q9NYK5 338 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 IL20Q9NYY1 176 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 WARS2Q9UGM6 360 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 NOX1Q9Y5S8 564 aa10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAPPC9-206ENST00000519482 LOC390937A0A1W2PQ73 354 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 H3BMQ9 156 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 LY6HO94772 140 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 MT-ATP6P00846 226 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 MT-ND2P03891 347 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 FAM157CP0CG43 387 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 IGHV4-31P0DP07 118 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 NPR2P20594 1047 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 FUT4P22083 530 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 SLC15A1P46059 708 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 GZMKP49863 264 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 POU3F1Q03052 451 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 PRKCDQ05655 676 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 PUDPQ08623 228 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 ST3GAL4Q11206 333 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 IRF3Q14653 427 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 LINC00114Q6XXX2 140 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 TMPRSS11FQ6ZWK6 438 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 AHSA2Q719I0 299 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 ZNF627Q7L945 461 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 PXKQ7Z7A4 578 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 ZNF837Q96EG3 531 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 COG8Q96MW5 612 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 FUNDC2Q9BWH2 189 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 RAB1BQ9H0U4 201 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 SEC61A2Q9H9S3 476 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 LPAR3Q9UBY5 353 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 STAB1Q9NY15 2570 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 FBN3Q75N90 2809 aa10.78□□□□□ -0.68
TRAPPC9-206ENST00000519482 IGHV2OR16-5A0A0B4J2B6 119 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 SLC35F4A4IF30 521 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 ZNF503-AS2A6NEH8 195 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 ZNF726A6NNF4 738 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 SLC22A1O15245 554 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 CHP2O43745 196 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 INMTO95050 263 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 CELA3BP08861 270 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 HLA-DOBP13765 273 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 THBS4P35443 961 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 NR4A2P43354 598 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 CAPZA2P47755 286 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 IDH3GP51553 393 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 GP2P55259 537 aaKnown RBP10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 HGFACQ04756 655 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 PIGFQ07326 219 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 SNAPC1Q16533 368 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 PHYHD1Q5SRE7 291 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 TMEM236Q5W0B7 351 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 VHLLQ6RSH7 139 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 NHLRC1Q6VVB1 395 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 MDP1Q86V88 176 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 MYPOPQ86VE0 399 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 OR5J2Q8NH18 312 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 TMEM239Q8WW34 195 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 SGCDQ92629 289 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 RFKQ969G6 155 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 YIPF6Q96EC8 236 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 TMEM80Q96HE8 168 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 MOGAT1Q96PD6 335 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 EMC6Q9BV81 110 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 B3GNT2Q9NY97 397 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 TVP23BQ9NYZ1 205 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 AASSQ9UDR5 926 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 ENPP5Q9UJA9 477 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 SLC7A7Q9UM01 511 aa10.77□□□□□ -0.69
TRAPPC9-206ENST00000519482 BAIAP2Q9UQB8 552 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms