RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 RBMXL3Q8N7X1 1067 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 GJC3Q8NFK1 279 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 OR6Q1Q8NGQ2 317 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 RNF166Q96A37 237 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 NABP1Q96AH0 204 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 ZNF775Q96BV0 537 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 MAP6Q96JE9 813 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 PDCD1LG2Q9BQ51 273 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 MOB1AQ9H8S9 216 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 CENPMQ9NSP4 180 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 FRRS1LQ9P0K9 344 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 ASH2LQ9UBL3 628 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 PEX16Q9Y5Y5 336 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 PMF1-BGLAPU3KQ54 211 aa13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 PHF3Q92576 2039 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-205ENST00000518839 TRAV1-2A0A0B4J238 106 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 IQCMA0A1B0GVH7 501 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 LOC110117498-PIK3R3F6TDL0 507 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 RPL36A-HNRNPH2H7BZ11 118 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 ZFPL1O95159 310 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 CST2P09228 141 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 CALRP27797 417 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 ID4P47928 161 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 MMP16P51512 607 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 GRB2P62993 217 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 TAF13Q15543 124 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 C3AR1Q16581 482 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 Q499Y3 187 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 OTPQ5XKR4 325 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 ZNF704Q6ZNC4 412 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 ABHD12BQ7Z5M8 362 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 CATSPERDQ86XM0 798 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 TUSC5Q8IXB3 177 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 GPR148Q8TDV2 347 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 APH1AQ96BI3 265 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 DCLRE1CQ96SD1 692 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 ZNF416Q9BWM5 594 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 CALHM2Q9HA72 323 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 CRLF2Q9HC73 371 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 GPR35Q9HC97 309 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 HMG20AQ9NP66 347 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 TMEM38BQ9NVV0 291 aa13.29□□□□□ -0.28
TRAPPC9-205ENST00000518839 CACNA1CQ13936 2221 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 TRBV5-5A0A0J9YX44 114 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 AHRRA9YTQ3 701 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 ZNF587BE7ETH6 402 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 TAF4O00268 1085 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 FARS2O95363 451 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 APOC1P02654 83 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 RAF1P04049 648 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 PDGFAP04085 211 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 UCHL1P09936 223 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 HSD11B1P28845 292 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 NTF4P34130 210 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 PCBD1P61457 104 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 RPS11P62280 158 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 MXD1Q05195 221 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 HNRNPA0Q13151 305 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 ENDOGQ14249 297 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 ZNF846Q147U1 533 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 HSD17B12Q53GQ0 312 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 WDR38Q5JTN6 314 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 SPATC1Q76KD6 591 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 ADGRE4PQ86SQ3 457 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 SYT9Q86SS6 491 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 HSD17B8Q92506 261 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 ABHD17AQ96GS6 310 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 GMPPAQ96IJ6 420 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 ALKBH3Q96Q83 286 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 TAAR6Q96RI8 345 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 FOXB1Q99853 325 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 WDR12Q9GZL7 423 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 C6orf62Q9GZU0 229 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 DDX28Q9NUL7 540 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 CLCF1Q9UBD9 225 aa13.28□□□□□ -0.28
TRAPPC9-205ENST00000518839 ARHGAP21Q5T5U3 1957 aa13.27□□□□□ -0.28
TRAPPC9-205ENST00000518839 TMEM269A0A1B0GVZ9 245 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 ACOD1A6NK06 481 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 CLDN25C9JDP6 229 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 PDCD5O14737 125 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 TMEM127O75204 238 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 SRSF10O75494 262 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 UBCP0CG48 685 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 KIR3DL2P43630 455 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 PSMA6P60900 246 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 HIST1H3AP68431 136 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 SCRN3Q0VDG4 424 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 CEACAM16Q2WEN9 425 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 KRTCAP3Q53RY4 240 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 HIST2H3PS2Q5TEC6 136 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 TSPO2Q5TGU0 170 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 TMEM244Q5VVB8 128 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 CFAP77Q6ZQR2 320 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 HIST2H3AQ71DI3 136 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 ZNF100Q8IYN0 542 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 PRSS35Q8N3Z0 413 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 SLITRK2Q9H156 845 aa13.27□□□□□ -0.29
TRAPPC9-205ENST00000518839 TPK1Q9H3S4 243 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms