RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 KCTD14Q9BQ13 255 aaPredicted RBP-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 REEP4Q9H6H4 257 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 ACTR8Q9H981 624 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 MRPL47Q9HD33 250 aaKnown RBP-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 CNIH4Q9P003 139 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 RNF14Q9UBS8 474 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 AK6Q9Y3D8 172 aaKnown RBP-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 HSPG2P98160 4391 aa-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 TNRC6BQ9UPQ9 1833 aaKnown RBP-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 BRCA1P38398 1863 aaKnown RBP-1.24□□□□□ -2.61
SCARNA23-201ENST00000516060 SHANK3Q9BYB0 1731 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 FAM230AA0A1W2PPH8 454 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 PFKFB2O60825 505 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 C1QCP02747 245 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 ZNF705DP0CH99 300 aaPredicted RBP-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 ZNF705BP0CI00 300 aaPredicted RBP-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 RAB3BP20337 219 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 SERPINB5P36952 375 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 HOXC5Q00444 222 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 ZNF92Q03936 586 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 TSTA3Q13630 321 aaPredicted RBP-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 MAPK6Q16659 721 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 TCEAL5Q5H9L2 206 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 SLC25A25Q6KCM7 469 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 PET117Q6UWS5 81 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 KCTD9Q7L273 389 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 FA2HQ7L5A8 372 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 KDM8Q8N371 416 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 TCAIMQ8N3R3 496 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 SLC25A45Q8N413 288 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 DHRSXQ8N5I4 330 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 LEMD2Q8NC56 503 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 OR10A7Q8NGE5 316 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 OR10J6PQ8NGY7 276 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 OR8K3Q8NH51 312 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 OR51F2Q8NH61 342 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 OR2V1Q8NHB1 315 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 ZNF420Q8TAQ5 688 aaPredicted RBP-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 TCEAL3Q969E4 200 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 SEH1LQ96EE3 360 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 CCDC114Q96M63 670 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 VSTM2LQ96N03 204 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 P2RX4Q99571 388 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 ZNF251Q9BRH9 671 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 NIPSNAP3BQ9BS92 247 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 UFSP2Q9NUQ7 469 aa-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 ZNF443Q9Y2A4 671 aaPredicted RBP-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 KLK5Q9Y337 293 aaPredicted RBP-1.25□□□□□ -2.61
SCARNA23-201ENST00000516060 TGM6O95932 706 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 CTSLP07711 333 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 CD3GP09693 182 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 CCNB1P14635 433 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 ETS2P15036 469 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 IFNAR1P17181 557 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 NELFEP18615 380 aaKnown RBP-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 CDKN1BP46527 198 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 OR12D2P58182 307 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 TAS2R43P59537 309 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 IRX3P78415 501 aaPredicted RBP-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 SIGLEC14Q08ET2 396 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 PPP1R8Q12972 351 aaKnown RBP-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 ZNF791Q3KP31 576 aaPredicted RBP-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 KRTAP19-7Q3SYF9 63 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 PTPN20Q4JDL3 420 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 SFT2D3Q587I9 215 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 MFSD4BQ5TF39 518 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 MOB3BQ86TA1 216 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 COMTD1Q86VU5 262 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 TGIF2LXQ8IUE1 241 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 YIPF5Q969M3 257 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 NCLNQ969V3 563 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 TRIB3Q96RU7 358 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 NXF5Q9H1B4 397 aaKnown RBP-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 INIPQ9NRY2 104 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 RDH8Q9NYR8 311 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 LIPT1Q9Y234 373 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 TMED5Q9Y3A6 229 aa-1.26□□□□□ -2.61
SCARNA23-201ENST00000516060 TPRP12270 2363 aaKnown RBP-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 CACNA1AO00555 2505 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 ZANQ9Y493 2812 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 A0A0G2JQZ4 141 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 OR6C74A6NCV1 312 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 GABRR3A8MPY1 467 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 NDUFC2-KCTD14E9PQ53 114 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 CHMP2AO43633 222 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 VEGFDO43915 354 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 MGRN1O60291 552 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 CDC40O60508 579 aaKnown RBP eCLIP-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 FKBP6O75344 327 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 ENTPD6O75354 484 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 EIF3JO75822 258 aaKnown RBP-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 NRASP01111 189 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 HRASP01112 189 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 KRASP01116 189 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 H2BFMP0C1H6 154 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 DRD5P21918 477 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 AHCYP23526 432 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 IL12AP29459 219 aa-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 COILP38432 576 aaPredicted RBP-1.27□□□□□ -2.61
SCARNA23-201ENST00000516060 RPL13AP40429 203 aaKnown RBP-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms