RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 IGKV3D-11A0A0A0MRZ8 115 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 IGHV1OR15-9A0A0B4J2B8 117 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 GLYATL1P3A0A0U1RQE8 302 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 ZNF688P0C7X2 276 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 TNNI1P19237 187 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 CHMLP26374 656 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 DCKP27707 260 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 FOXN2P32314 431 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 ARFIP1P53367 373 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 ADARB1P78563 741 aaKnown RBP2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 SLC25A11Q02978 314 aaKnown RBP2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 SLC39A6Q13433 755 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 KDELC1Q6UW63 502 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 UNQ9165/PRO28630Q6UXU0 137 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 B3GNT7Q8NFL0 401 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 ZNF488Q96MN9 340 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 ATP5SQ99766 215 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 KCNE3Q9Y6H6 103 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 CAMTA1Q9Y6Y1 1673 aa2.36□□□□□ -2.03
SMARCA5-203ENST00000515531 CPLX1O14810 134 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 CHST1O43916 411 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 CD3GP09693 182 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 NCF2P19878 526 aaPredicted RBP2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 RAB3AP20336 220 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 P2RX1P51575 399 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 QPRTQ15274 297 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 BRD3OSQ6XYD6 125 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 LRP11Q86VZ4 500 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 CDKL3Q8IVW4 592 aaPredicted RBP2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 MIR7-3HGQ8N6C7 128 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 PTX4Q96A99 478 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 SLC25A46Q96AG3 418 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 TUBGCP3Q96CW5 907 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 DNAJC1Q96KC8 554 aaKnown RBP2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 GCOM2Q9BZD3 368 aaPredicted RBP2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 OR52D1Q9H346 318 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 C1orf198Q9H425 327 aa2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 FGF20Q9NP95 211 aaPredicted RBP2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 PSMC3IPQ9P2W1 217 aaPredicted RBP2.35□□□□□ -2.03
SMARCA5-203ENST00000515531 TRAV6A0A075B6T7 132 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 TRAV19A0A0A6YYK7 116 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 KIR2DS1A0A191URI9 304 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 LGALS9O00182 355 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 CHST10O43529 356 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 RDH16O75452 317 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 HLA-DQB1P01920 261 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 ZNF735P0CB33 412 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 PABPC4LP0CB38 370 aaKnown RBP2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 HCAR3P49019 387 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 CSNK1EP49674 416 aaKnown RBP2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 BST1Q10588 318 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 RCAN2Q14206 197 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 KIR2DS1Q14954 304 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 AVPI1Q5T686 147 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 PRAMEF5Q5TYX0 476 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 PRAMEF6Q5VXH4 476 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 NIPA1Q7RTP0 329 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 SLC16A13Q7RTY0 426 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 TMEM256Q8N2U0 113 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 OR2A1Q8NGT9 310 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 OR5B3Q8NH48 314 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 HSD17B10Q99714 261 aaKnown RBP2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 LZTS2Q9BRK4 669 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 SLC2A8Q9NY64 477 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 SIGLEC9Q9Y336 463 aa2.34□□□□□ -2.03
SMARCA5-203ENST00000515531 AHDC1Q5TGY3 1603 aaPredicted RBP2.34□□□□□ -2.04
SMARCA5-203ENST00000515531 CENPVL3A0A0U1RRI6 287 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 LRRIQ3A6PVS8 624 aaPredicted RBP2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 H0YJW9 148 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 NUPL2O15504 423 aaKnown RBP2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 SOCS1O15524 211 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 CDC40O60508 579 aaKnown RBP eCLIP2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 CBR3O75828 277 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 CLPXO76031 633 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 OR8U9P0C7N5 309 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 HNRNPH3P31942 346 aaKnown RBP2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 GPX4P36969 197 aaPredicted RBP2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 RND2P52198 227 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 CDKN2DP55273 166 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 MPV17L2Q567V2 206 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 TCEAL5Q5H9L2 206 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 NECAB1Q8N987 351 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 FBXL13Q8NEE6 735 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 CIRBP-AS1Q8TBR5 109 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 SHC3Q92529 594 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 TCEAL3Q969E4 200 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 OR5B12Q96R08 314 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 MICU1Q9BPX6 476 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 SLC38A10Q9HBR0 1119 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 STARD10Q9Y365 291 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 TSSC4Q9Y5U2 329 aaPredicted RBP2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 USP47Q96K76 1375 aa2.33□□□□□ -2.04
SMARCA5-203ENST00000515531 ZNF716A6NP11 495 aa2.32□□□□□ -2.04
SMARCA5-203ENST00000515531 L7N2F9 121 aa2.32□□□□□ -2.04
SMARCA5-203ENST00000515531 KLHL41O60662 606 aa2.32□□□□□ -2.04
SMARCA5-203ENST00000515531 REM1O75628 298 aa2.32□□□□□ -2.04
SMARCA5-203ENST00000515531 CST1P01037 141 aa2.32□□□□□ -2.04
SMARCA5-203ENST00000515531 IGKV1D-16P01601 117 aa2.32□□□□□ -2.04
SMARCA5-203ENST00000515531 SERPINA5P05154 406 aa2.32□□□□□ -2.04
SMARCA5-203ENST00000515531 SLC2A3P11169 496 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms