RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	FNDC8	Q8TC99	324 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	TMEM255B	Q8WV15	326 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	ITLN1	Q8WWA0	313 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	RASSF5	Q8WWW0	418 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	LIPH	Q8WWY8	451 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	TAMM41	Q96BW9	452 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	RBP7	Q96R05	134 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	EBF4	Q9BQW3	602 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	CCDC28B	Q9BUN5	200 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	ALG12	Q9BV10	488 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	PARD6B	Q9BYG5	372 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	BEX1	Q9HBH7	125 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	TUBG2	Q9NRH3	451 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	C20orf141	Q9NUB4	165 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	TBCCD1	Q9NVR7	557 aa		13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	PDP1	Q9P0J1	537 aa	Predicted RBP	13.21	□□□□□ -0.29
LMNA-223	ENST00000515459	DOCK11	Q5JSL3	2073 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	MDFIC2	A0A1B0GVS7	189 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	TMEM178B	H3BS89	294 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	CRYBA1	P05813	215 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	RPS2	P15880	293 aa	Known RBP	13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	MTPN	P58546	118 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	TAS2R41	P59536	307 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	TOP3A	Q13472	1001 aa	Predicted RBP	13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	LAPTM4A	Q15012	233 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	INTS11	Q5TA45	600 aa	Known RBP	13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	DHDDS	Q86SQ9	333 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	SYT9	Q86SS6	491 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	NKAIN4	Q8IVV8	208 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	KIR3DL3	Q8N743	410 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	OR4F5	Q8NH21	305 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	RAB40A	Q8WXH6	277 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	CMBL	Q96DG6	245 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	OR2V2	Q96R30	315 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	CCT8L2	Q96SF2	557 aa		13.2	□□□□□ -0.3
LMNA-223	ENST00000515459	IGHV2-70D	A0A0C4DH43	119 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459		A0A1W2PPL8	197 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	FAM181B	A6NEQ2	426 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	C12orf71	A8MTZ7	269 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	MMP16	P51512	607 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	MAGOH	P61326	146 aa	Known RBP	13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	RPL27	P61353	136 aa	Known RBP	13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	GNB2	P62879	340 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	SELPLG	Q14242	412 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	ALG10	Q5BKT4	473 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	FOXL2NB	Q6ZUU3	175 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	POU5F2	Q8N7G0	328 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	CLDN22	Q8N7P3	220 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	OR10S1	Q8NGN2	331 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	TMEM239	Q8WW34	195 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	ZDHHC16	Q969W1	377 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	C7orf26	Q96N11	449 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	CGREF1	Q99674	301 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	MMP27	Q9H306	513 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	POFUT1	Q9H488	388 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	PRDM13	Q9H4Q3	707 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	GCM1	Q9NP62	436 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	ARMCX1	Q9P291	453 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	MIOX	Q9UGB7	285 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	SH3GLB1	Q9Y371	365 aa		13.19	□□□□□ -0.3
LMNA-223	ENST00000515459	NOTCH1	P46531	2555 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	SRRM5	B3KS81	715 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	IFNL4	K9M1U5	179 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459		M0QZ24	198 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	COX5B	P10606	129 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	MSR1	P21757	451 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	RAG2	P55895	527 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	GUCY1A3	Q02108	690 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	ENDOG	Q14249	297 aa	Known RBP	13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	DEFB112	Q30KQ8	113 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	FAM205BP	Q63HN1	556 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	OLFML2A	Q68BL7	652 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	BRICD5	Q6PL45	260 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	FIP1L1	Q6UN15	594 aa	Known RBP	13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	BRD3OS	Q6XYD6	125 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	KLB	Q86Z14	1044 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	DPP10	Q8N608	796 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	DACT3	Q96B18	629 aa	Predicted RBP	13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	HAVCR1	Q96D42	359 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	PLEKHA8	Q96JA3	519 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	MAGEB18	Q96M61	343 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	COG8	Q96MW5	612 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	CITED1	Q99966	193 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	WAC	Q9BTA9	647 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	POLR2J2	Q9GZM3	115 aa	Known RBP	13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	POLR2J3	Q9H1A7	115 aa	Known RBP	13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	KAT8	Q9H7Z6	458 aa	Known RBP	13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	TMEM165	Q9HC07	324 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	RIMS3	Q9UJD0	308 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	HIF3A	Q9Y2N7	669 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	NDUFAF1	Q9Y375	327 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	MED31	Q9Y3C7	131 aa		13.18	□□□□□ -0.3
LMNA-223	ENST00000515459	KIR2DS1	A0A191URI9	304 aa		13.17	□□□□□ -0.3
LMNA-223	ENST00000515459	TIMM23	O14925	209 aa		13.17	□□□□□ -0.3
LMNA-223	ENST00000515459	ZNF205	O95201	554 aa		13.17	□□□□□ -0.3
LMNA-223	ENST00000515459	OR5F1	O95221	314 aa		13.17	□□□□□ -0.3
LMNA-223	ENST00000515459	HTR5A	P47898	357 aa		13.17	□□□□□ -0.3
LMNA-223	ENST00000515459	CRYBA2	P53672	197 aa		13.17	□□□□□ -0.3
LMNA-223	ENST00000515459	PIN1	Q13526	163 aa	Predicted RBP	13.17	□□□□□ -0.3
LMNA-223	ENST00000515459	SLC27A4	Q6P1M0	643 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms