RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 SLC46A1Q96NT5 459 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 FAM173AQ9BQD7 235 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 ZBP1Q9H171 429 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 AUNIPQ9H7T9 357 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 TAS2R4Q9NYW5 299 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 LINC01553A4QN01 128 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 CD3DP04234 171 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 GJA4P35212 333 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 MAT1AQ00266 395 aaKnown RBP12.17□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF92Q03936 586 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 RIMKLAQ8IXN7 391 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 OR1J1Q8NGS3 322 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 CMTM2Q8TAZ6 248 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 LHX4Q969G2 390 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 POMT2Q9UKY4 750 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 A0A0B4J203 849 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 HCRTR1O43613 425 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 FABP1P07148 127 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 TGM1P22735 817 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 FCER1GP30273 86 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 AKR1C3P42330 323 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 DEFB133Q30KQ1 61 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 MED25Q71SY5 747 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 AAED1Q7RTV5 226 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 ANKRD33Q7Z3H0 272 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 BTLAQ7Z6A9 289 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 ZFP62Q8NB50 900 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-214ENST00000515035 OR4F5Q8NH21 305 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 GPR119Q8TDV5 335 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 DUSP23Q9BVJ7 150 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 PLEKHA2Q9HB19 425 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 SLC35D1Q9NTN3 355 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 NTNG1Q9Y2I2 539 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 IFITM5A6NNB3 132 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 SLC2A1P11166 492 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 FOLR3P41439 243 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 EPHA5P54756 1037 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 PLAC9Q5JTB6 97 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 LRRTM1Q86UE6 522 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 MFSD4AQ8N468 514 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 OR5AP2Q8NGF4 316 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 FAM174AQ8TBP5 190 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 PPP1R1CQ8WVI7 109 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 CMC2Q9NRP2 79 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 HCSTQ9UBK5 93 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
TCOF1-214ENST00000515035 ARID1AO14497 2285 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 A0A087WV62 115 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 A0A1W2PPQ1 181 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 ANKRD61A6NGH8 418 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 BCL2L11O43521 198 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 SLC2A10O95528 541 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 UBE2G2P60604 165 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 TPBGQ13641 420 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 CLEC12BQ2HXU8 276 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 TMEM179BQ7Z7N9 219 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 CCDC190Q86UF4 302 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 GALNT16Q8N428 558 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 LRFN5Q96NI6 719 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 DCBLD2Q96PD2 775 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 FLVCR1Q9Y5Y0 555 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 UTS2O95399 124 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 CER1O95813 267 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 POU3F3P20264 500 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-214ENST00000515035 DCTDP32321 178 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 OR13C5Q8NGS8 318 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF2Q9BSG1 426 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-214ENST00000515035 MTCH1Q9NZJ7 389 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 LOC107986453A0A1B0GWG9 222 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 OR8U8P0C7N1 319 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 NPPBP16860 134 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
TCOF1-214ENST00000515035 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 NAT6Q93015 286 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 PIGQQ9BRB3 760 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 PCDHB10Q9UN67 800 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 E5RGE8 158 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 FXYD1O00168 92 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 ABHD16AO95870 558 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 PI3P19957 117 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 S100A7P31151 101 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 TMEM64Q6YI46 380 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 OR14A16Q8NHC5 309 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 STT3BQ8TCJ2 826 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 FAM122AQ96E09 287 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 RHOFQ9HBH0 211 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 NSG2Q9Y328 171 aa12.16□□□□□ -0.46
TCOF1-214ENST00000515035 EPHA2P29317 976 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 MPGP29372 298 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 ABHD17CQ6PCB6 329 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 OR5B3Q8NH48 314 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 LIPHQ8WWY8 451 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 MED18Q9BUE0 208 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 PLA2G12AQ9BZM1 189 aa12.15□□□□□ -0.46
TCOF1-214ENST00000515035 IKZF5Q9H5V7 419 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms