RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CTDSPLO15194 276 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 MBP02144 154 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 CRYBA1P05813 215 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 CD14P08571 375 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 CD37P11049 281 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 SERPINA2P20848 420 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 TMEM184AQ6ZMB5 413 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 OR52R1Q8NGF1 315 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 ORAI1Q96D31 301 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 FOXN4Q96NZ1 517 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 C19orf43Q9BQ61 176 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 EPHX3Q9H6B9 360 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 PCDHGA9Q9Y5G4 932 aaKnown RBP10.27□□□□□ -0.77
TCOF1-211ENST00000513346 ASCC3Q8N3C0 2202 aaKnown RBP10.27□□□□□ -0.77
TCOF1-211ENST00000513346 A6NIZ1 184 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 PHOX2AO14813 284 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 HOXD4P09016 255 aaPredicted RBP10.27□□□□□ -0.77
TCOF1-211ENST00000513346 PAX6P26367 422 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 PCBP3P57721 371 aaKnown RBP10.27□□□□□ -0.77
TCOF1-211ENST00000513346 RAP1BP61224 184 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 TMEM52BQ4KMG9 183 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 FIP1L1Q6UN15 594 aaKnown RBP10.27□□□□□ -0.77
TCOF1-211ENST00000513346 GPR137CQ8N3F9 429 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 ADOQ96SZ5 270 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 IL21Q9HBE4 155 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 A0A1W2PPC1 479 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF354AO60765 605 aaPredicted RBP10.27□□□□□ -0.77
TCOF1-211ENST00000513346 CFDP00746 253 aaPredicted RBP10.27□□□□□ -0.77
TCOF1-211ENST00000513346 SPP1P10451 314 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF43P17038 809 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 OR1D4P47884 311 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 KCNJ3P48549 501 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 ZNF266Q14584 549 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 MEP1BQ16820 701 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 C2orf76Q3KRA6 126 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 BEND4Q6ZU67 534 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 NKAIN3Q8N8D7 197 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 OR5M8Q8NGP6 311 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 RASD2Q96D21 266 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 LYSMD1Q96S90 227 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 ZDHHC5Q9C0B5 715 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 OPN4Q9UHM6 478 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 FOXJ3Q9UPW0 622 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 SLC7A11Q9UPY5 501 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 BDP1A6H8Y1 2624 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 GOLGB1Q14789 3259 aaKnown RBP10.27□□□□□ -0.77
TCOF1-211ENST00000513346 MFSD2BA6NFX1 497 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 H3BML4 177 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 H7C1C5 153 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 GLSO94925 669 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 HIST1H1CP16403 213 aaKnown RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 SFTPDP35247 375 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 SLC6A8P48029 635 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 PCBP4P57723 403 aaKnown RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 LCN6P62502 163 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 RPL23AP62750 156 aaKnown RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 TMEM41BQ5BJD5 291 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 KCNIP4Q6PIL6 250 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 TCTN2Q96GX1 697 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 TMEM59Q9BXS4 323 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 MTFP1Q9UDX5 166 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 VDAC3Q9Y277 283 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 TAF1LQ8IZX4 1826 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 THBS1P07996 1170 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 PTHLHP12272 177 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 APEHP13798 732 aaKnown RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 PMPCAQ10713 525 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 DOC2BQ14184 412 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 SLC25A30Q5SVS4 291 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 FAM111BQ6SJ93 734 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 PLPP6Q8IY26 295 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 DND1Q8IYX4 353 aaKnown RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 AGBL5Q8NDL9 886 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 KCNG3Q8TAE7 436 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 DDIT4LQ96D03 193 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 KIRREL1Q96J84 757 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 TMPRSS13Q9BYE2 586 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 CHRDQ9H2X0 955 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 CUTCQ9NTM9 273 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 CGGBP1Q9UFW8 167 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 PISDQ9UG56 409 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 KCND3Q9UK17 655 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 LSM2Q9Y333 95 aaKnown RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 ANKRD20A5PA0PJZ0 165 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 AP4M1O00189 453 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 TMPRSS11DO60235 418 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 FZD6O60353 706 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 CD63P08962 238 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 NID1P14543 1247 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 CSRP3P50461 194 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 CASP6P55212 293 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 RAE1P78406 368 aaKnown RBP10.26□□□□□ -0.77
TCOF1-211ENST00000513346 SRYQ05066 204 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 ERV3-1Q14264 604 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 EEF1A1P5Q5VTE0 462 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 OR52W1Q6IF63 320 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 SLC22A24Q8N4F4 322 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 OR4D6Q8NGJ1 314 aa10.26□□□□□ -0.77
TCOF1-211ENST00000513346 OR10D4PQ8NGN7 298 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms