RNA–Protein interactions for RNA: ENST00000512820.5

LIMCH1-216, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-216ENST00000512820 SERPINF1P36955 418 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 RIN1Q13671 783 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 WDR38Q5JTN6 314 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ZNF529Q6P280 563 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ANKRD16Q6P6B7 361 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 H1FNTQ75WM6 255 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 OTOSQ8NHW6 89 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 TMED6Q8WW62 240 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 MR1Q95460 341 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ELSPBP1Q96BH3 223 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 BORCS8Q96FH0 119 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 LINC00052Q96N35 136 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 OR8B4Q96RC9 309 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 PRSS27Q9BQR3 290 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 CRB3Q9BUF7 120 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 S1PR5Q9H228 398 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 TMEM229AB2RXF0 380 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 IMPA2O14732 288 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 CTAG2O75638 210 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 CPN1P15169 458 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ZNF16P17020 682 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 PSMB6P28072 239 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 AGFG1P52594 562 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 C17orf67Q0P5P2 114 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ELAVL1Q15717 326 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 Q5BKY6 102 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 TMEM81Q6P7N7 255 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 PGAP1Q75T13 922 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 TMEM229BQ8NBD8 167 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ASB13Q8WXK3 278 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 TSLPQ969D9 159 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 MRGPRX1Q96LB2 322 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 EMC6Q9BV81 110 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 BANF2Q9H503 90 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 CCDC86Q9H6F5 360 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ST6GALNAC2Q9UJ37 374 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ARPC4-TTLL3A0A0A6YYG9 625 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 SEMA7AO75326 666 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 AKR7A3O95154 331 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 GPANK1O95872 356 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ANKRD34CP0C6C1 535 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 FLI1Q01543 452 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 AVPI1Q5T686 147 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 MEX3BQ6ZN04 569 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 MISPQ8IVT2 679 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 OR1M1Q8NGA1 313 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 OR52N5Q8NH56 324 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 TCTEX1D2Q8WW35 142 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 C4orf45Q96LM5 186 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 CLCC1Q96S66 551 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ABHD6Q9BV23 337 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 C1QTNF6Q9BXI9 259 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 TXNIPQ9H3M7 391 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 PIKFYVEQ9Y2I7 2098 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 SHISA3A0PJX4 238 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 ZNF254O75437 659 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 AQP8O94778 261 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 IFNA5P01569 189 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 CFIP05156 583 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 SLC26A5P58743 744 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 IAH1Q2TAA2 248 aaPredicted RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 LYG2Q86SG7 212 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 NAXDQ8IW45 347 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 CCDC71LQ8N9Z2 235 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 NPEPL1Q8NDH3 523 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 OR4S1Q8NGB4 309 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 CXorf58Q96LI9 332 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 OR10A2Q9H208 303 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 UNKLQ9H9P5 680 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 C1orf123Q9NWV4 160 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 MRM2Q9UI43 246 aaKnown RBP7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 R4GMQ9 66 aa7.62□□□□□ -1.19
LIMCH1-216ENST00000512820 SEC14L5O43304 696 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 BCL2L11O43521 198 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 FCGR2AP12318 317 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 HRH1P35367 487 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 TMEM176BQ3YBM2 270 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 SCGB1C1Q8TD33 95 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 S100PBPQ96BU1 408 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 SRPK3Q9UPE1 567 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 PCDHGA9Q9Y5G4 932 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 CKAP5Q14008 2032 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 PCM1Q15154 2024 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 WDR81Q562E7 1941 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 A0A0B4J293 547 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 OTOL1A6NHN0 477 aaPredicted RBP7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 HMSDA8MTL9 139 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 SHOXO15266 292 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 PEBP1P30086 187 aaKnown RBP7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 GABREP78334 506 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 ACY1Q03154 408 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 RTL6Q6ICC9 239 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 GPR137CQ8N3F9 429 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 SPACA5Q96QH8 159 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 LUZP4Q9P127 313 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 CHRNA9Q9UGM1 479 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 PTP4A3O75365 173 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 IL33O95760 270 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 IFNA17P01571 189 aa7.61□□□□□ -1.19
LIMCH1-216ENST00000512820 GNB3P16520 340 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms