RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 RORCP51449 518 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 PMP22Q01453 160 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 DYNC1I2Q13409 638 aaKnown RBP7.16□□□□□ -1.26
HTT-209ENST00000512068 ALKBH1Q13686 389 aaKnown RBP7.16□□□□□ -1.26
HTT-209ENST00000512068 CDK5R1Q15078 307 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 INAQ16352 499 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 SGCAQ16586 387 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 MEP1BQ16820 701 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ZNF404Q494X3 552 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 TEX30Q5JUR7 227 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 SLC25A47Q6Q0C1 308 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 C19orf48Q6RUI8 117 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 IGFL3Q6UXB1 125 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 LRRN1Q6UXK5 716 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 SPATC1Q76KD6 591 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 DCXRQ7Z4W1 244 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ABHD12BQ7Z5M8 362 aaPredicted RBP7.16□□□□□ -1.26
HTT-209ENST00000512068 LINC00346Q8IVM7 164 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ZNF679Q8IYX0 411 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 RFLNBQ8N5W9 214 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ZNF676Q8N7Q3 588 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ZNF485Q8NCK3 441 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 OR5AK2Q8NH90 309 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 MCFD2Q8NI22 146 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ABHD3Q8WU67 409 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 C11orf40Q8WZ69 217 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 AP3S1Q92572 193 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 TMEM54Q969K7 222 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 TMEM45BQ96B21 275 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ZNF385AQ96PM9 386 aaKnown RBP7.16□□□□□ -1.26
HTT-209ENST00000512068 OR8B4Q96RC9 309 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 TM9SF2Q99805 663 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ZNF649Q9BS31 505 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 HDHD5Q9BXW7 423 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 C6orf62Q9GZU0 229 aaPredicted RBP7.16□□□□□ -1.26
HTT-209ENST00000512068 SLITRK2Q9H156 845 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 NELFAQ9H3P2 528 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 SIAEQ9HAT2 523 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ELOVL3Q9HB03 270 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 CENPMQ9NSP4 180 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 MRPL22Q9NWU5 206 aaKnown RBP7.16□□□□□ -1.26
HTT-209ENST00000512068 UPB1Q9UBR1 384 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 GRIP1Q9Y3R0 1128 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 CSAG2Q9Y5P2 127 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 LIPGQ9Y5X9 500 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 CACNA1CQ13936 2221 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 ZNF407Q9C0G0 2248 aa7.16□□□□□ -1.26
HTT-209ENST00000512068 TRIM64BA6NI03 449 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 SLC22A20A6NK97 555 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 TMEM212A6NML5 194 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 ZNF716A6NP11 495 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 ZNF724A8MTY0 619 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 ZNF879B4DU55 563 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 ZNF878C9JN71 531 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 AQP7O14520 342 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 MAGEB4O15481 346 aaPredicted RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 OGG1O15527 345 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 GATBO75879 557 aaKnown RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 CDRT1O95170 752 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 MPZL1O95297 269 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 FARS2O95363 451 aaKnown RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 LALBAP00709 142 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 IL1AP01583 271 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 CD1AP06126 327 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 CPN1P15169 458 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 FGF9P31371 208 aaPredicted RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 ADMP35318 185 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 PTGS2P35354 604 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 RPS27P42677 84 aaKnown RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 ID4P47928 161 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 LSM6P62312 80 aaKnown RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 FABP5Q01469 135 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 YIF1BQ5BJH7 314 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 C10orf128Q5T292 105 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 LIPNQ5VXI9 398 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 DMKNQ6E0U4 476 aaPredicted RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 OR7E24Q6IFN5 339 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 DEGS2Q6QHC5 323 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 FAM180AQ6UWF9 173 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 RPTNQ6XPR3 784 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 NLRC3Q7RTR2 1065 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 CEACAM19Q7Z692 300 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 C20orf196Q8IYI0 205 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 ZNF100Q8IYN0 542 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 DYNC2LI1Q8TCX1 351 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 RNF128Q8TEB7 428 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 TSEN15Q8WW01 171 aaKnown RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 S100ZQ8WXG8 99 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 PHYHIPQ92561 330 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 GHSRQ92847 366 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 APH1AQ96BI3 265 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 SLAMF6Q96DU3 332 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 DACH2Q96NX9 599 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 ABHD6Q9BV23 337 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 WDR12Q9GZL7 423 aaKnown RBP7.15□□□□□ -1.26
HTT-209ENST00000512068 SLCO5A1Q9H2Y9 848 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 MMP27Q9H306 513 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 NIPAL2Q9H841 368 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 CALHM2Q9HA72 323 aa7.15□□□□□ -1.26
HTT-209ENST00000512068 HMG20AQ9NP66 347 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms