RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 RERGQ96A58 199 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 ACDQ96AP0 544 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 NDC1Q9BTX1 674 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 TUBB1Q9H4B7 451 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 TMEM27Q9HBJ8 222 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 LRRC4CQ9HCJ2 640 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 NIT2Q9NQR4 276 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 ASB6Q9NWX5 421 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 ING3Q9NXR8 418 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 B3GNT2Q9NY97 397 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC17A6Q9P2U8 582 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 THAP10Q9P2Z0 257 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 GNG12Q9UBI6 72 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 MRPS18CQ9Y3D5 142 aaKnown RBP4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR51B4Q9Y5P0 310 aa4.49□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDFY3Q8IZQ1 3526 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 ASPMQ8IZT6 3477 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 FRG2CA6NGY1 282 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 FADS1O60427 444 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 IFNA4P05014 189 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 S100A8P05109 93 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 CSN3P07498 182 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 HOXD4P09016 255 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF25P17030 456 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 GABRG2P18507 467 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 TACR1P25103 407 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 CDX1P47902 265 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 DAP3P51398 398 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC10A7Q0GE19 358 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC10A2Q12908 348 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 PTGES3Q15185 160 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR2B11Q5JQS5 317 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDR25Q64LD2 544 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 XKRXQ6PP77 449 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 COX15Q7KZN9 410 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 LINGO2Q7L985 606 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDR53Q7Z5U6 358 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF557Q8N988 423 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDSUB1Q8N9V3 476 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 DCAF4L2Q8NA75 395 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR2AE1Q8NHA4 323 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 RAB39BQ96DA2 213 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 C14orf144Q96I85 54 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 CNBD2Q96M20 576 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 SORCS2Q96PQ0 1159 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 RNF157Q96PX1 679 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 FYTTD1Q96QD9 318 aaKnown RBP4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF670Q9BS34 389 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 FUNDC2Q9BWH2 189 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR10A5Q9H207 317 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 NT5DC2Q9H857 520 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 FKRPQ9H9S5 495 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF556Q9HAH1 456 aa4.48□□□□□ -1.69
TRAPPC11-208ENST00000511955 A0A087WXM4 84 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 A0A1W2PPK0 400 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 LINC00862A6NCI5 91 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 TVP23AA6NH52 213 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 C3orf70A6NLC5 250 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 F5H768 121 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 PSTPIP1O43586 416 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 LDB3O75112 727 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 RP2O75695 350 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 TSPAN13O95857 204 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRKCGP05129 697 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 DBHP09172 617 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 GNRHRP30968 328 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 AKR1C3P42330 323 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 CDKN2BP42772 138 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 MAGEA5P43359 124 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 GPR1P46091 355 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 CAV2P51636 162 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 CLDN12P56749 244 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 RAP2BP61225 183 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 OC90Q02509 493 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 ACVR1Q04771 509 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 TCF15Q12870 199 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRPSAP1Q14558 356 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF235Q14590 738 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF528Q3MIS6 628 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 PARP15Q460N3 678 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC22A6Q4U2R8 563 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 SOWAHCQ53LP3 525 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 TFDP3Q5H9I0 405 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 EMC4Q5J8M3 183 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 FGD3Q5JSP0 725 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 C6orf141Q5SZD1 244 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 TPRG1LQ5T0D9 272 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 OTUD3Q5T2D3 398 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 ATAD3CQ5T2N8 411 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 C9orf64Q5T6V5 341 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 LYPLAL1Q5VWZ2 237 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAHD1Q6P587 224 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 C22orf39Q6P5X5 142 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 DRAM2Q6UX65 266 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 SPNS3Q6ZMD2 512 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 CREB3L2Q70SY1 520 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 ASCL5Q7RTU5 278 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 ANGPTL5Q86XS5 388 aa4.47□□□□□ -1.69
TRAPPC11-208ENST00000511955 UMODL1-AS1Q8N2C9 162 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms