RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	TUBA1A	Q71U36	451 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	DPY19L4	Q7Z388	723 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	PHC2	Q8IXK0	858 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	UBE2J2	Q8N2K1	259 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	YIPF7	Q8N8F6	280 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	OR2AJ1	Q8NGZ0	328 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	OTOS	Q8NHW6	89 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	THEM6	Q8WUY1	208 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	DMRTA2	Q96SC8	542 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	VKORC1	Q9BQB6	163 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	DCUN1D5	Q9BTE7	237 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	SFXN3	Q9BWM7	321 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	KCNN2	Q9H2S1	579 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	POLE4	Q9NR33	117 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	MALT1	Q9UDY8	824 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	PROCR	Q9UNN8	238 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	MEMO1	Q9Y316	297 aa		10.37	□□□□□ -0.75
APBB3-217	ENST00000511459	KALRN	O60229	2985 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459		A0A0G2JNJ9	132 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	PNMA8C	A0A1B0GUJ8	204 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	METTL15	A6NJ78	407 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	ZNF587B	E7ETH6	402 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	CNOT4	O95628	575 aa	Known RBP	10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	PSKH1	P11801	424 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	NR4A1	P22736	598 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	SOX6	P35712	828 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	FOXG1	P55316	489 aa	Predicted RBP	10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	OR12D2	P58182	307 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	VBP1	P61758	197 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	MRPS34	P82930	218 aa	Known RBP	10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	EIF2B1	Q14232	305 aa	Known RBP	10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	SGCA	Q16586	387 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	CTF1	Q16619	201 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	PCK2	Q16822	640 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	TEX30	Q5JUR7	227 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	TMEM211	Q6ICI0	200 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	RPL22L1	Q6P5R6	122 aa	Known RBP	10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	KRT77	Q7Z794	578 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	ATCAY	Q86WG3	371 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	HTRA1	Q92743	480 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	NABP1	Q96AH0	204 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	ZNF649	Q9BS31	505 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	MRO	Q9BYG7	248 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	EMC7	Q9NPA0	242 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	TMEM38B	Q9NVV0	291 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459		Q9UFV3	132 aa		10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	SMG1	Q96Q15	3661 aa	Known RBP	10.36	□□□□□ -0.75
APBB3-217	ENST00000511459	FREM1	Q5H8C1	2179 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	PHF3	Q92576	2039 aa	Known RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459		A0A1W2PPW3	197 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	GPRIN2	O60269	458 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	ATE1	O95260	518 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	IL18BP	O95998	194 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	PRB1	P04280	392 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	CD8B	P10966	210 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	NPR2	P20594	1047 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	GAL	P22466	123 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	MPG	P29372	298 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	OPRM1	P35372	400 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	UGT2B10	P36537	528 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	CD79B	P40259	229 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	RPS27	P42677	84 aa	Known RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	LSM6	P62312	80 aa	Known RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	ARF1	P84077	181 aa	Known RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	SSX1	Q16384	188 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	FAM27B	Q5VT28	67 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	C9orf135	Q5VTT2	229 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	ARL9	Q6T311	187 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	PAMR1	Q6UXH9	720 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459		Q6ZT83	130 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	MS4A15	Q8N5U1	240 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	ZNF610	Q8N9Z0	462 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	ZNF485	Q8NCK3	441 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	GALNT11	Q8NCW6	608 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	KCTD7	Q96MP8	289 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	FOXB1	Q99853	325 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	TMED9	Q9BVK6	235 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	TTTY10	Q9BZA0	68 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	OPN3	Q9H1Y3	402 aa	Predicted RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	OR51E2	Q9H255	320 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	DCSTAMP	Q9H295	470 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	NELFA	Q9H3P2	528 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	ISG20L2	Q9H9L3	353 aa	Known RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	SIAE	Q9HAT2	523 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	ZNF629	Q9UEG4	869 aa	Predicted RBP	10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	COPS3	Q9UNS2	423 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	KLHDC2	Q9Y2U9	406 aa		10.35	□□□□□ -0.75
APBB3-217	ENST00000511459	TRBV2	A0A0J9YWF9	115 aa		10.34	□□□□□ -0.75
APBB3-217	ENST00000511459	TRDV1	A0A1B0GX56	115 aa		10.34	□□□□□ -0.75
APBB3-217	ENST00000511459		B8ZZF3	427 aa		10.34	□□□□□ -0.75
APBB3-217	ENST00000511459	CCL21	O00585	134 aa		10.34	□□□□□ -0.75
APBB3-217	ENST00000511459	ZNF254	O75437	659 aa		10.34	□□□□□ -0.75
APBB3-217	ENST00000511459	RGS9	O75916	674 aa	Predicted RBP	10.34	□□□□□ -0.75
APBB3-217	ENST00000511459	ITGA5	P08648	1049 aa		10.34	□□□□□ -0.75
APBB3-217	ENST00000511459	ALOX5AP	P20292	161 aa		10.34	□□□□□ -0.75
APBB3-217	ENST00000511459	MSR1	P21757	451 aa		10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms