RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ZNRF4Q8WWF5 429 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 ADAT1Q9BUB4 502 aaKnown RBP13.48□□□□□ -0.25
USP38-202ENST00000510377 GAREM1Q9H706 876 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 BIN3Q9NQY0 253 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 SDHAF3Q9NRP4 125 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 PCDHB10Q9UN67 800 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 B9D1Q9UPM9 204 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 SLC22A23A1A5C7 686 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 TUBAL3A6NHL2 446 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 SGCEO43556 437 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 SNAPINO95295 136 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 TMEM196Q5HYL7 178 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 PTCRAQ6ISU1 281 aaPredicted RBP13.48□□□□□ -0.25
USP38-202ENST00000510377 ZNF595Q8IYB9 648 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 OR51T1Q8NGJ9 327 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 MAFIPQ8WZ33 124 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 DAZLQ92904 295 aaKnown RBP13.48□□□□□ -0.25
USP38-202ENST00000510377 ZNF707Q96C28 371 aaPredicted RBP13.48□□□□□ -0.25
USP38-202ENST00000510377 WDR77Q9BQA1 342 aaPredicted RBP13.48□□□□□ -0.25
USP38-202ENST00000510377 URM1Q9BTM9 101 aaKnown RBP13.48□□□□□ -0.25
USP38-202ENST00000510377 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.48□□□□□ -0.25
USP38-202ENST00000510377 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 OR52A1Q9UKL2 312 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 RFPL4AA6NLU0 287 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 C1orf196B1AJZ1 125 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 RFPL4AL1F8VTS6 287 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 CTDSPLO15194 276 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 KLF4O43474 513 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 FXYD4P59646 89 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 ZNF74Q16587 644 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 ACOT7LQ6ZUV0 252 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 GLRX5Q86SX6 157 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 GALNT16Q8N428 558 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 OR5T2Q8NGG2 359 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 HAVCR2Q8TDQ0 301 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 GPR119Q8TDV5 335 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 TMEM234Q8WY98 164 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 SLC25A32Q9H2D1 315 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 METTL7AQ9H8H3 244 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 GMEB2Q9UKD1 530 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 RPS10-NUDT3A0A1W2PQS6 291 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ADH6P28332 368 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 BDKRB2P30411 391 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 HRH1P35367 487 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 RIPPLY1Q0D2K3 151 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 PDZK1IP1Q13113 114 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 SLC17A1Q14916 467 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ETFDHQ16134 617 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 OR1S2Q8NGQ3 325 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 MARCH1Q8TCQ1 289 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ASB17Q8WXJ9 295 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 PGAM5Q96HS1 289 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 PIGMQ9H3S5 423 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ZNF629Q9UEG4 869 aaPredicted RBP13.47□□□□□ -0.25
USP38-202ENST00000510377 DCTN6O00399 190 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ARPC3O15145 178 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ALOX12BO75342 701 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 GNB3P16520 340 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 CNR1P21554 472 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 H2BFSP57053 126 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 PLA2G7Q13093 441 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ELOCQ15369 112 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 DEFB133Q30KQ1 61 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ANGPTL5Q86XS5 388 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 TSLPQ969D9 159 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 C12orf57Q99622 126 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 CRB3Q9BUF7 120 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 TMED7-TICAM2A0A0A6YYA0 188 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 PLSCR5A0PG75 271 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 WRBO00258 174 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 SDCBPO00560 298 aaPredicted RBP13.47□□□□□ -0.25
USP38-202ENST00000510377 SLC17A2O00624 439 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 TSPAN15O95858 294 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 CYCSP99999 105 aaKnown RBP13.47□□□□□ -0.25
USP38-202ENST00000510377 LPAL2Q16609 132 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ANKRD16Q6P6B7 361 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 ZNF679Q8IYX0 411 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 GVQW1Q8N7I0 195 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 WNT2BQ93097 391 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 C4orf45Q96LM5 186 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 C20orf24Q9BUV8 137 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 MMP25Q9NPA2 562 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 TMED7Q9Y3B3 224 aa13.47□□□□□ -0.25
USP38-202ENST00000510377 F5H5K5 113 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 IGKV1D-16P01601 117 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 CPN1P15169 458 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 PEA15Q15121 130 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 OR5M9Q8NGP3 310 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 MFSD8Q8NHS3 518 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 EHFQ9NZC4 300 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 MPZL1O95297 269 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 PET100P0DJ07 73 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 ACAA2P42765 397 aaKnown RBP13.46□□□□□ -0.25
USP38-202ENST00000510377 SLC6A8P48029 635 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 OR5D14Q8NGL3 314 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 ZNF578Q96N58 590 aaPredicted RBP13.46□□□□□ -0.25
USP38-202ENST00000510377 GDF15Q99988 308 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 ABHD6Q9BV23 337 aa13.46□□□□□ -0.25
USP38-202ENST00000510377 B3GALT1Q9Y5Z6 326 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms