RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 HIPK1Q86Z02 1210 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 PARP8Q8N3A8 854 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SVOPLQ8N434 492 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC22A24Q8N4F4 322 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 PAQR4Q8N4S7 273 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 CBR4Q8N4T8 237 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF525Q8N782 197 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 ATG16L2Q8NAA4 619 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 NUP37Q8NFH4 326 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 OR51L1Q8NGJ5 315 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 RBP7Q96R05 134 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 GABARAPL3Q9BY60 117 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 NDEL1Q9GZM8 345 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 RAB1BQ9H0U4 201 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 PLK3Q9H4B4 646 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 YY1AP1Q9H869 796 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC25A19Q9HC21 320 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 HINT3Q9NQE9 182 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 RPRD1BQ9NQG5 326 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 POLE4Q9NR33 117 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 PAPOLBQ9NRJ5 636 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 USE1Q9NZ43 259 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 GRHPRQ9UBQ7 328 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 FBXO9Q9UK97 447 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 B9D1Q9UPM9 204 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 CMAHPQ9Y471 501 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 CSPG4Q6UVK1 2322 aa7.55□□□□□ -1.2
PDLIM5-213ENST00000509357 PLCE1Q9P212 2302 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 IGHV4-30-2A0A087WSY4 118 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 IQCMA0A1B0GVH7 501 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 CCDC182A6NF36 153 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 A6NIZ1 184 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 INAFM1C9JVW0 142 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC16A7O60669 478 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 LY6HO94772 140 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 SNAP29O95721 258 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 PTHP01270 115 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 NR2C1P13056 603 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC25A16P16260 332 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF14P17017 642 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 HOXB6P17509 224 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 GSTM3P21266 225 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 IGFBP5P24593 272 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 POU1F1P28069 291 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 LAP3P28838 519 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 PDLIM4P50479 330 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 RPS6KA3P51812 740 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 RAP1BP61224 184 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 RPS23P62266 143 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 RAP1AP62834 184 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 MRPS34P82930 218 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 HSF2Q03933 536 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 PLP2Q04941 152 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 COX10Q12887 443 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 PTGES3Q15185 160 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 SGCAQ16586 387 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 MST1LQ2TV78 715 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 ZIK1Q3SY52 487 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 THEM4Q5T1C6 240 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 SLX4IPQ5VYV7 408 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 FAM205BPQ63HN1 556 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 GPR139Q6DWJ6 353 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 DPPA2Q7Z7J5 298 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 ZDHHC13Q8IUH4 622 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 LRRC18Q8N456 261 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 CPEB3Q8NE35 698 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 OR2T33Q8NG76 320 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 OR10S1Q8NGN2 331 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 C11orf40Q8WZ69 217 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 SNX18Q96RF0 628 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF416Q9BWM5 594 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF442Q9H7R0 627 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 CDH20Q9HBT6 801 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 CCNB1IP1Q9NPC3 277 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 KRCC1Q9NPI7 259 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 YAE1D1Q9NRH1 226 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 CMC2Q9NRP2 79 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 LHFPL6Q9Y693 200 aa7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 CHD3Q12873 2000 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-213ENST00000509357 HIVEP2P31629 2446 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 A0A1W2PPL8 197 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 A0A1W2PPW3 197 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 C5orf63A6NC05 138 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 TVP23AA6NH52 213 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 PRR32B1ATL7 298 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 H3BN98 237 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 CASQ2O14958 399 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 BAG2O95816 211 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 SERPINA5P05154 406 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 ADRA2AP08913 450 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 CCL2P13500 99 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF32P17041 273 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 SPI1P17947 270 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 CCNOP22674 350 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 NR4A1P22736 598 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 GRK5P34947 590 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 GGT2P36268 569 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 ALDH3A2P51648 485 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 GGTLC2Q14390 218 aa7.53□□□□□ -1.2
PDLIM5-213ENST00000509357 EFNB3Q15768 340 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms