RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ZNF224Q9NZL3 707 aa17.49■□□□□ 0.39
USP53-203ENST00000507597 VSTM5A8MXK1 200 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 ENTPD6O75354 484 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 GPANK1O95872 356 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 IGLV1-44P01699 117 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 SCG5P05408 212 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 CD40P25942 277 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 SLC15A1P46059 708 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 MTNR1AP48039 350 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 GDI2P50395 445 aaKnown RBP17.48■□□□□ 0.39
USP53-203ENST00000507597 PSG4Q00888 419 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 RAB39AQ14964 217 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 MAD2L1BPQ15013 274 aaPredicted RBP17.48■□□□□ 0.39
USP53-203ENST00000507597 RAB35Q15286 201 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 PCK2Q16822 640 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 KLHL22Q53GT1 634 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 PABPC1L2AQ5JQF8 200 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 ELFN2Q5R3F8 820 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 NCMAPQ5T1S8 102 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 C6orf52Q5T4I8 152 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 SEZ6L2Q6UXD5 910 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 RHOUQ7L0Q8 258 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 TIGD4Q8IY51 512 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 UBE2FQ969M7 185 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 MRPL48Q96GC5 212 aaKnown RBP17.48■□□□□ 0.39
USP53-203ENST00000507597 PLPPR2Q96GM1 343 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 CDH20Q9HBT6 801 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 EIF3KQ9UBQ5 218 aaKnown RBP17.48■□□□□ 0.39
USP53-203ENST00000507597 LAMP5Q9UJQ1 280 aa17.48■□□□□ 0.39
USP53-203ENST00000507597 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.47■□□□□ 0.39
USP53-203ENST00000507597 OR6C6A6NF89 314 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 A6NNC1 897 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 DOK2O60496 412 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 APOC1P02654 83 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 PATE4P0C8F1 98 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 GABRB1P18505 474 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 ISL1P61371 349 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 GALK2Q01415 458 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 TAF13Q15543 124 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 KCTD18Q6PI47 426 aaPredicted RBP17.47■□□□□ 0.39
USP53-203ENST00000507597 DPY19L4Q7Z388 723 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 C1orf174Q8IYL3 243 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 SLC30A7Q8NEW0 376 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 OR4F15Q8NGB8 312 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 ZNRF4Q8WWF5 429 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 ASB17Q8WXJ9 295 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 HTRA1Q92743 480 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 DCLRE1CQ96SD1 692 aaKnown RBP17.47■□□□□ 0.39
USP53-203ENST00000507597 GDF2Q9UK05 429 aaPredicted RBP17.47■□□□□ 0.39
USP53-203ENST00000507597 LHFPL6Q9Y693 200 aa17.47■□□□□ 0.39
USP53-203ENST00000507597 IGHV1-18A0A0C4DH31 117 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 CCDC182A6NF36 153 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 ZNF670-ZNF695F2Z2N8 137 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 CLIC3O95833 236 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 LYNP07948 512 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 SBK2P0C263 348 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 ZNF14P17017 642 aaPredicted RBP17.46■□□□□ 0.39
USP53-203ENST00000507597 STOMP27105 288 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 SSTR2P30874 369 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 HTR5AP47898 357 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 HIST1H3AP68431 136 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 MED21Q13503 144 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 EIF2B1Q14232 305 aaKnown RBP17.46■□□□□ 0.39
USP53-203ENST00000507597 HIST2H3PS2Q5TEC6 136 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 KRT80Q6KB66 452 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 C22orf34Q6ZV56 151 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 USP51Q70EK9 711 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 HIST2H3AQ71DI3 136 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 DCXRQ7Z4W1 244 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 BCDIN3DQ7Z5W3 292 aaKnown RBP17.46■□□□□ 0.39
USP53-203ENST00000507597 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.46■□□□□ 0.39
USP53-203ENST00000507597 OR51G2Q8NGK0 314 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 OTOSQ8NHW6 89 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 FGFBP3Q8TAT2 258 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 THEM6Q8WUY1 208 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 SPTSSAQ969W0 71 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 C14orf79Q96F83 325 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 PIK3IP1Q96FE7 263 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 COQ7Q99807 217 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 ANKRD60Q9BZ19 345 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 RNF115Q9Y4L5 304 aa17.46■□□□□ 0.39
USP53-203ENST00000507597 SETXQ7Z333 2677 aaKnown RBP17.45■□□□□ 0.38
USP53-203ENST00000507597 FLNBO75369 2602 aaKnown RBP17.45■□□□□ 0.38
USP53-203ENST00000507597 LRRK2Q5S007 2527 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 RER1O15258 196 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 FADS2O95864 444 aaKnown RBP17.45■□□□□ 0.38
USP53-203ENST00000507597 OR2T7P0C7T2 308 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 CECR9P0C854 216 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 NAA10P41227 235 aaPredicted RBP17.45■□□□□ 0.38
USP53-203ENST00000507597 ACTC1P68032 377 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 ACTA1P68133 377 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 NAAAQ02083 359 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 BSPH1Q075Z2 132 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 LINC00346Q8IVM7 164 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 OR2T27Q8NH04 317 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 OR1F12Q8NHA8 337 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 AKR7LQ8NHP1 331 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 RNFT2Q96EX2 444 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 WNT5BQ9H1J7 359 aa17.45■□□□□ 0.38
USP53-203ENST00000507597 SP140LQ9H930 580 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms