RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ZNF208O43345 1280 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 WBP4O75554 376 aaKnown RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 GCM2O75603 506 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 APOL3O95236 402 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 LCKP06239 509 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 ANXA3P12429 323 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 GALP22466 123 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 OR3A2P47893 321 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 HOXA1P49639 335 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 DIO1P49895 249 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 DAPP51397 102 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 CCR4P51679 360 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 NKX6-1P78426 367 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 CD83Q01151 205 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 RASGEF1BQ0VAM2 473 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 FUT5Q11128 374 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 SYPL1Q16563 259 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 MICAQ29983 383 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 SYT14P1Q58G82 188 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 CLVS2Q5SYC1 327 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 CD276Q5ZPR3 534 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 ANKRD34AQ69YU3 496 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 ADAM5Q6NVV9 412 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 PRSS57Q6UWY2 283 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 TFAP2EQ6VUC0 442 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 Q6ZT83 130 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 OVCH2Q7RTZ1 564 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 ZNF550Q7Z398 422 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 NUFIP2Q7Z417 695 aaKnown RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 GALNT5Q7Z7M9 940 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 CXorf67Q86X51 503 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 ENTHD1Q8IYW4 607 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 UBE2J2Q8N2K1 259 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 C9orf62Q8N4C0 152 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 ZNF563Q8TA94 476 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 VANGL1Q8TAA9 524 aaPredicted RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 UBASH3BQ8TF42 649 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 OR2M2Q96R28 347 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 MGLLQ99685 303 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 TMEM204Q9BSN7 226 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 INPP5KQ9BT40 448 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 MND1Q9BWT6 205 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 ASPNQ9BXN1 380 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 SLC38A1Q9H2H9 487 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 C12orf49Q9H741 205 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 NGBQ9NPG2 151 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 DLL4Q9NR61 685 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 CLN6Q9NWW5 311 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 IMPAD1Q9NX62 359 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 CALML5Q9NZT1 146 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 MBD2Q9UBB5 411 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 CHRNA9Q9UGM1 479 aa7.09□□□□□ -1.27
SCN1A-207ENST00000507401 NUFIP1Q9UHK0 495 aaKnown RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 SAMHD1Q9Y3Z3 626 aaKnown RBP7.09□□□□□ -1.27
SCN1A-207ENST00000507401 ACANP16112 2415 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 FLNAP21333 2647 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF469Q96JG9 3925 aaPredicted RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 FREM1Q5H8C1 2179 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 C2CD3Q4AC94 2353 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 C7orf66A4D0T2 115 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF814B7Z6K7 855 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 GPR171O14626 319 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 RGS5O15539 181 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 EIF1BO60739 113 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 SMPD2O60906 423 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 PMS2P2O95744 297 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 LALBAP00709 142 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ADAP00813 363 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 SEMG1P04279 462 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 CHRM4P08173 479 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 TSPAN19P0C672 248 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 NR2F1P10589 423 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 PAX1P15863 534 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 RPS4Y1P22090 263 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 STOMP27105 288 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 CDKN2CP42773 168 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 SLC1A3P43003 542 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 IDH2P48735 452 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 INPP1P49441 399 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 MVDP53602 400 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 SLC16A1P53985 500 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 H3F3AP84243 136 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 PIGFQ07326 219 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 FOXD4Q12950 439 aaPredicted RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 MLLT11Q13015 90 aaPredicted RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 LARS2Q15031 903 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 AANATQ16613 207 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 Q5BKY6 102 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 FAM131AQ6UXB0 335 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 OLIG3Q7RTU3 272 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 CYP4Z1Q86W10 505 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF440Q8IYI8 595 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 EIF4E3Q8N5X7 224 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 LINC00469Q8N7U9 141 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF611Q8N823 705 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 PROKR2Q8NFJ6 384 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 IGFBPL1Q8WX77 278 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ASB13Q8WXK3 278 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 GGHQ92820 318 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms