RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GLAP06280 429 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 ZNF688P0C7X2 276 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 CCNB1P14635 433 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 UBE2NP61088 152 aaKnown RBP1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 CRADDP78560 199 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 FUT5Q11128 374 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 TWF1Q12792 350 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 H2BFWTQ7Z2G1 175 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 EFL1Q7Z2Z2 1120 aaKnown RBP1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 PDIK1LQ8N165 341 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 EID2Q8N6I1 236 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 TRPV1Q8NER1 839 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 OR1S2Q8NGQ3 325 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 RHEBL1Q8TAI7 183 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 SYAP1Q96A49 352 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 WDR34Q96EX3 536 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 FRMD8P1Q9BZ68 369 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 SLC7A8Q9UHI5 535 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 ZNF639Q9UID6 485 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 MRPS7Q9Y2R9 242 aaKnown RBP1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 HYOU1Q9Y4L1 999 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 NPTNQ9Y639 398 aa1.28□□□□□ -2.2
HMGB1P29-201ENST00000505659 ZNF878C9JN71 531 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 MAGEB3O15480 346 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 YWHAGP61981 247 aaKnown RBP eCLIP1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 SLC25A11Q02978 314 aaKnown RBP1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 PRKCDQ05655 676 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 FAM53BQ14153 422 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 PDK3Q15120 406 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 CFAP157Q5JU67 520 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 AVPI1Q5T686 147 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 STUMQ69YW2 141 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 ANKRD26P1Q6NSI1 321 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 CASP12Q6UXS9 341 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZNF101Q8IZC7 436 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 MS4A15Q8N5U1 240 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 APCDD1LQ8NCL9 501 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 STEAP2Q8NFT2 490 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 TTLQ8NG68 377 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 OR10AD1Q8NGE0 317 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 CXorf40AQ8TE69 158 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 SEH1LQ96EE3 360 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 CNDP1Q96KN2 507 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 IFT74Q96LB3 600 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 RBBP8Q99708 897 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 EDA2RQ9HAV5 297 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 SGK2Q9HBY8 427 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 SH3BGRL2Q9UJC5 107 aa1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 LSM7Q9UK45 103 aaKnown RBP1.27□□□□□ -2.21
HMGB1P29-201ENST00000505659 FOXE1O00358 373 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 CHST10O43529 356 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 CLIC3O95833 236 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 CRYGBP07316 175 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZNF250P15622 560 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 KITLGP21583 273 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 TNFSF9P41273 254 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 PSMD8P48556 350 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 CDKN2DP55273 166 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 HCP5Q6MZN7 132 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 PMF1Q6P1K2 205 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 LINC00336Q6ZUF6 198 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 ADM2Q7Z4H4 148 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 LRRC75A-AS1Q8N1F1 130 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZNF680Q8NEM1 530 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 PLPPR1Q8TBJ4 325 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 KLF14Q8TD94 323 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 STMN2Q93045 179 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 GALNT14Q96FL9 552 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 IP6K3Q96PC2 410 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 HSD17B10Q99714 261 aaKnown RBP1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 RHOXF2Q9BQY4 288 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 LZTS2Q9BRK4 669 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 GORASP2Q9H8Y8 452 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 NT5MQ9NPB1 228 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 C21orf62Q9NYP8 219 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 TRMT112Q9UI30 125 aaKnown RBP1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 CLEC4AQ9UMR7 237 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 SCN4AP35499 1836 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 MUC6Q6W4X9 2439 aa1.26□□□□□ -2.21
HMGB1P29-201ENST00000505659 ARPC4-TTLL3A0A0A6YYG9 625 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 DYNC1I1O14576 645 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 NOL3O60936 208 aaKnown RBP1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 EEDO75530 441 aaKnown RBP1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 CLPXO76031 633 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 IGLV6-57P01721 117 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 HCAR3P49019 387 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 PPP1CBP62140 327 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 UBE2HP62256 183 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 KCNJ2P63252 427 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 ZNF235Q14590 738 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 ATAD3BQ5T9A4 648 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 LRRC29Q8WV35 223 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 PKNOX2Q96KN3 472 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 GGTLC1Q9BX51 225 aa1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 ROPN1BQ9BZX4 212 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P29-201ENST00000505659 MAPK8IP3Q9UPT6 1336 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 TRAV19A0A0A6YYK7 116 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 IGHV7-4-1A0A0J9YVY3 117 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 OR6C74A6NCV1 312 aa1.24□□□□□ -2.21
HMGB1P29-201ENST00000505659 GMFGO60234 142 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms