RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 OR14J1Q9UGF5 321 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 HEATR5BQ9P2D3 2071 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 TIAF1O95411 115 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 NAGAP17050 411 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 CCR6P51684 374 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 INPP5JQ15735 1006 aaPredicted RBP12.69□□□□□ -0.38
TCOF1-207ENST00000504761 SLC25A35Q3KQZ1 300 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 TRILQ7L0X0 811 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 SIAH3Q8IW03 269 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 OR9K2Q8NGE7 335 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 OR5M9Q8NGP3 310 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 NUBPLQ8TB37 319 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 GCDHQ92947 438 aaPredicted RBP12.69□□□□□ -0.38
TCOF1-207ENST00000504761 RNF170Q96K19 258 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
TCOF1-207ENST00000504761 PFDN2Q9UHV9 154 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 CCDC163A0A0D9SF12 145 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 C17orf51A8MQB3 221 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 CSF1P09603 554 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 PCMT1P22061 227 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 SSX6Q7RTT6 188 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 BPIFB2Q8N4F0 458 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 C17orf47Q8NEP4 570 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 CHPT1Q8WUD6 406 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 ZBTB8AQ96BR9 441 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 MUCL1Q96DR8 90 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 LANCL2Q9NS86 450 aa12.69□□□□□ -0.38
TCOF1-207ENST00000504761 GDF2Q9UK05 429 aaPredicted RBP12.69□□□□□ -0.38
TCOF1-207ENST00000504761 M0R135 149 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 GDF9O60383 454 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 SLC22A5O76082 557 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 DIRAS3O95661 229 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 ACAA2P42765 397 aaKnown RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 GLIPR1L1Q6UWM5 242 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 LIPHQ8WWY8 451 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 ZNF799Q96GE5 643 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 ARL6Q9H0F7 186 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 RBM38Q9H0Z9 239 aaKnown RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 OR51J1Q9H342 316 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 KCNE5Q9UJ90 142 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 CCL3P10147 92 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 CEACAM16Q2WEN9 425 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 CCDC58Q4VC31 144 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 ATG4DQ86TL0 474 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 SLC22A24Q8N4F4 322 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 TEX19Q8NA77 164 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 OR11G2Q8NGC1 345 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 AKR7LQ8NHP1 331 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 LRFN5Q96NI6 719 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 TRIB1Q96RU8 372 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 STEAP1Q9UHE8 339 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 ZNF223Q9UK11 482 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 FBXL2Q9UKC9 423 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 SERPINA7P05543 415 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 CASP3P42574 277 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 IDH3GP51553 393 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 SKP2Q13309 424 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 AGAP6Q5VW22 663 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 Q6ZTK2 550 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 BEND4Q6ZU67 534 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 OR5L1Q8NGL2 311 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 GRPEL2Q8TAA5 225 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 CRLF2Q9HC73 371 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 DNAJB11Q9UBS4 358 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 PLSCR5A0PG75 271 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 M0R233 179 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 RRP8O43159 456 aaKnown RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 CD34P28906 385 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 GRK1Q15835 563 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 EXOSC6Q5RKV6 272 aaKnown RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 RAB12Q6IQ22 244 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 SLC16A12Q6ZSM3 486 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 PGAP1Q75T13 922 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 TRAPPC6BQ86SZ2 158 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 LSMEM1Q8N8F7 131 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 OR2V1Q8NHB1 315 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 RAB3CQ96E17 227 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 AKIRIN1Q9H9L7 192 aaPredicted RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 GPR173Q9NS66 373 aa12.68□□□□□ -0.38
TCOF1-207ENST00000504761 RBFOX1Q9NWB1 397 aaKnown RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 MDC1Q14676 2089 aaKnown RBP12.68□□□□□ -0.38
TCOF1-207ENST00000504761 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 ZFPL1O95159 310 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 ARHGDIBP52566 201 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 SF3B4Q15427 424 aaKnown RBP eCLIP12.67□□□□□ -0.389e-7■■■■□ 20
TCOF1-207ENST00000504761 ZNF684Q5T5D7 378 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 OR5AS1Q8N127 324 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 MICU1Q9BPX6 476 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 ADGRL4Q9HBW9 690 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 M0QYG6 137 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 RER1O15258 196 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 EMP3P54852 163 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 MRPS10P82664 201 aaKnown RBP12.67□□□□□ -0.38
TCOF1-207ENST00000504761 TNK1Q13470 666 aa12.67□□□□□ -0.38
TCOF1-207ENST00000504761 METAP1DQ6UB28 335 aaPredicted RBP12.67□□□□□ -0.38
TCOF1-207ENST00000504761 ADGRG3Q86Y34 549 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms